Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNY1P5-201ENST00000383890 115 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 MIR518F-201ENST00000384973 87 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 AC015726.2-201ENST00000620112 122 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 MTND1P7-201ENST00000632801 297 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.28□□□□□ -2.04
TRIM55Q9BYV6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 RNU6-199P-201ENST00000362954 107 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 RNU6-457P-201ENST00000363999 107 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 MIR526A1-201ENST00000384897 85 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 MIR513A1-201ENST00000385138 129 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 MIR516B2-201ENST00000385190 85 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.778-201ENST00000620203 90 ntBASIC2.27□□□□□ -2.05
TRIM55Q9BYV6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 MIR1289-2-201ENST00000408360 111 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 TMSB4XP3-201ENST00000445144 114 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 AL096840.1-201ENST00000603287 93 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
TRIM55Q9BYV6 RNU6-704P-201ENST00000364162 103 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 SNORA25.7-201ENST00000364375 127 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 RNU4-11P-201ENST00000365287 132 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 SNORA1-201ENST00000384107 130 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 SNORA20-201ENST00000384662 132 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 MIR613-201ENST00000385248 95 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 SNORA25.12-201ENST00000516202 82 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 RNU6-426P-201ENST00000516464 97 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 MIR3646-201ENST00000578301 84 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 AL365205.2-201ENST00000594586 68 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 MIR6844-201ENST00000637122 62 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 AC132825.6-201ENST00000638861 357 ntBASIC2.25□□□□□ -2.05
TRIM55Q9BYV6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.215-201ENST00000364204 112 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 RNA5SP259-201ENST00000365541 109 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.400-201ENST00000383963 111 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 MIR136-201ENST00000385207 82 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 SNORD37.2-201ENST00000391075 66 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 AL356320.1-201ENST00000429616 163 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 RNU6-830P-201ENST00000516353 107 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 AC015688.6-201ENST00000577737 104 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 MIR3129-201ENST00000581095 76 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM55Q9BYV6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 SNORD115-28-201ENST00000363931 81 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 RNU6-1336P-201ENST00000383886 109 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.497-201ENST00000384447 98 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.542-201ENST00000384641 111 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 MIR764-201ENST00000390811 85 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 SNORA75.5-201ENST00000391291 81 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 AC005908.1-201ENST00000468701 347 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM55Q9BYV6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 RNU4-57P-201ENST00000515980 135 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 RNU6-917P-201ENST00000516294 104 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 MIR1273D-201ENST00000577266 86 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 FAM106DP-201ENST00000586416 501 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 AP001485.1-201ENST00000604799 199 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 AC091895.1-201ENST00000624494 256 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 AP000553.5-201ENST00000641933 54 ntBASIC2.22□□□□□ -2.05
TRIM55Q9BYV6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 SNORA67.3-201ENST00000384366 140 ntBASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 AF228730.3-201ENST00000436691 102 ntBASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 AC092991.1-201ENST00000477176 376 ntBASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 AC134878.1-201ENST00000619901 243 ntBASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
TRIM55Q9BYV6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms