Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.813-201ENST00000364639 102 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.315-201ENST00000365117 102 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 SNRPGP14-201ENST00000435400 219 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 RPL23AP54-201ENST00000495129 419 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 RNA5SP476-201ENST00000516613 103 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 MIR4514-201ENST00000581410 57 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 AC087685.1-201ENST00000587507 141 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 AC112487.2-201ENST00000637950 304 ntBASIC0.47□□□□□ -2.33
RPAP1Q9BWH6 RNU6-1209P-201ENST00000363655 107 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.252-201ENST00000364556 101 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.331-201ENST00000365267 102 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU6-396P-201ENST00000365369 105 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.384-201ENST00000383909 102 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.428-201ENST00000384078 102 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU6-937P-201ENST00000384325 106 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 MIR1278-201ENST00000408753 81 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNA5SP222-201ENST00000411039 105 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU2-14P-201ENST00000411053 191 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU6-130P-201ENST00000411112 103 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 HMGN1P10-201ENST00000474557 553 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 NDUFA4P2-201ENST00000489989 244 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU7-115P-201ENST00000516433 55 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 MIR2115-201ENST00000516657 100 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 SNORD116.3-201ENST00000517176 78 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 PART1_1.1-201ENST00000611761 217 ntBASIC0.46□□□□□ -2.34
RPAP1Q9BWH6 RNU6-1048P-201ENST00000364054 107 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 RNU6-801P-201ENST00000364087 105 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 RNU6-268P-201ENST00000364174 107 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.286-201ENST00000364813 102 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.370-201ENST00000365589 108 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.462-201ENST00000384268 102 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 MIR802-201ENST00000390235 94 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 RNU4-30P-201ENST00000410245 143 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC024067.1-201ENST00000426199 223 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AL606534.2-204ENST00000635008 178 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.143-201ENST00000363520 106 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.280-201ENST00000364765 112 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 RNY3P14-201ENST00000384309 102 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 AC127455.1-201ENST00000565496 145 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.45□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.70-201ENST00000362886 110 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.263-201ENST00000364659 114 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.356-201ENST00000365475 113 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 SNORA36.2-201ENST00000384004 127 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 SNORD63-201ENST00000384262 68 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.551-201ENST00000384661 102 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.579-201ENST00000390939 94 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 AL603910.2-201ENST00000407268 136 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 AL160004.2-201ENST00000432935 350 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 SNORA40.14-201ENST00000516543 86 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 RNU7-181P-201ENST00000517234 74 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 MIR548AO-201ENST00000579992 96 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 MIR2681-201ENST00000581814 105 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.772-201ENST00000606692 102 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 AC007485.1-201ENST00000616755 206 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 MIR548AY-201ENST00000617669 107 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
RPAP1Q9BWH6 RNU4-50P-201ENST00000364361 141 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 RNU1-115P-201ENST00000365329 160 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 SNORA51.10-201ENST00000384418 136 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 SNORA26.5-201ENST00000391215 123 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 RNU6-1046P-201ENST00000516538 107 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 RNU7-110P-201ENST00000516891 62 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 AL121655.1-201ENST00000605811 308 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 AC011373.1-201ENST00000607270 237 ntBASIC0.43□□□□□ -2.34
RPAP1Q9BWH6 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.197-201ENST00000364004 102 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 SNORD72-201ENST00000390994 80 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.645-201ENST00000391229 102 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 RNU7-141P-201ENST00000459304 62 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 MIR4795-201ENST00000584182 89 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 MIR4791-201ENST00000607666 84 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 uc_338.22-201ENST00000622722 187 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 MTND1P7-201ENST00000632801 297 ntBASIC0.42□□□□□ -2.34
RPAP1Q9BWH6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.31-201ENST00000362574 102 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.39-201ENST00000362620 98 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 RNU4-73P-201ENST00000363164 141 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 RNU6-580P-201ENST00000365159 107 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.383-201ENST00000383855 97 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.418-201ENST00000384029 102 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 Y_RNA.471-201ENST00000384312 102 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms