| CHCHD6 | Q9BRQ6 | AP003733.2-201 | ENST00000529409 | 171 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC131055.1-201 | ENST00000584626 | 316 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | NPPA-AS1_2.1-201 | ENST00000618496 | 149 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU6-321P-201 | ENST00000410912 | 106 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RPS3AP1-201 | ENST00000413190 | 320 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | BTF3P11-201 | ENST00000426582 | 477 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC005534.2-201 | ENST00000431047 | 433 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | MIR2115-201 | ENST00000516657 | 100 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC109810.1-201 | ENST00000534066 | 224 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC211469.2-201 | ENST00000605461 | 205 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC106800.4-201 | ENST00000614905 | 153 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | UBE2WP1-201 | ENST00000362030 | 340 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | MIR526A2-201 | ENST00000390198 | 65 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC073127.1-201 | ENST00000447336 | 333 nt | TSL 3 BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC005840.1-201 | ENST00000498412 | 377 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC025627.3-201 | ENST00000582078 | 182 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC044792.1-201 | ENST00000593294 | 196 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AL356055.1-201 | ENST00000602528 | 446 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AL136317.1-201 | ENST00000612653 | 226 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 0.98 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.11-201 | ENST00000362375 | 109 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.217-201 | ENST00000364214 | 105 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU6-1187P-201 | ENST00000364771 | 110 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.293-201 | ENST00000364908 | 93 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU6-639P-201 | ENST00000384074 | 107 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU6-613P-201 | ENST00000410412 | 108 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | U7.7-201 | ENST00000459276 | 60 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.641-201 | ENST00000459414 | 105 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | RNU4-57P-201 | ENST00000515980 | 135 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC023827.1-201 | ENST00000569247 | 97 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| CHCHD6 | Q9BRQ6 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SNORD113.3-201 | ENST00000364630 | 78 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-396P-201 | ENST00000365369 | 105 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR608-201 | ENST00000384820 | 100 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RPL21P38-201 | ENST00000418090 | 167 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SERF1AP1-201 | ENST00000514575 | 187 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC135050.6-201 | ENST00000610813 | 528 nt | TSL 3 BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.164-201 | ENST00000363709 | 102 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SNORA33.2-201 | ENST00000365413 | 134 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-985P-201 | ENST00000410182 | 104 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-383P-201 | ENST00000410864 | 94 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RPL39P28-201 | ENST00000465655 | 155 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-1110P-201 | ENST00000516462 | 101 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.701-201 | ENST00000516812 | 110 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | 0.95 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.4-201 | ENST00000362333 | 112 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.216-201 | ENST00000364205 | 93 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-662P-201 | ENST00000384253 | 104 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR215-201 | ENST00000384858 | 110 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR548O-201 | ENST00000408583 | 114 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR1302-7-201 | ENST00000408841 | 72 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-994P-201 | ENST00000410507 | 111 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC068658.1-201 | ENST00000507509 | 388 nt | TSL 2 BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | ACA64.5-201 | ENST00000516207 | 127 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.676-201 | ENST00000516393 | 96 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC036111.3-201 | ENST00000526389 | 112 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.84-201 | ENST00000363011 | 104 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.153-201 | ENST00000363615 | 91 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MT-TN-201 | ENST00000387400 | 73 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MTCYBP6-201 | ENST00000441810 | 138 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC087499.4-201 | ENST00000448505 | 178 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC090155.2-201 | ENST00000518854 | 267 nt | TSL 3 BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC006006.1-201 | ENST00000603082 | 144 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR6516-201 | ENST00000630554 | 81 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | CCDC14-221 | ENST00000489746 | 6476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MT-CO2-201 | ENST00000361739 | 684 nt | APPRIS P1 BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.376-201 | ENST00000365638 | 108 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.422-201 | ENST00000384054 | 114 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | Y_RNA.547-201 | ENST00000384654 | 119 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU6-1338P-201 | ENST00000516328 | 91 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | RNU7-25P-201 | ENST00000516544 | 62 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | MIR4653-201 | ENST00000585107 | 83 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | SNORD114-21-201 | ENST00000606412 | 72 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| CHCHD6 | Q9BRQ6 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 0.92 | □□□□□ -2.26 | | |