Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 RNA5SP401-201ENST00000515920 127 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 AL158050.2-201ENST00000605336 568 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-40-201ENST00000606510 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 AL596211.1-201ENST00000569873 2277 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 USMG5P1-201ENST00000425964 177 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 AC010655.3-201ENST00000478818 450 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 AC083904.1-201ENST00000487828 231 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 SNORA25.13-201ENST00000516395 103 ntBASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.1□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 RNU6-318P-201ENST00000384283 103 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 RNA5SP237-201ENST00000410414 113 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 USP9YP30-201ENST00000430729 455 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AL445193.1-201ENST00000441183 141 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 RNA5SP484-201ENST00000458857 111 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AP001328.1-201ENST00000528550 176 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AC092954.2-201ENST00000609103 430 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AC004223.4-201ENST00000612426 332 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 AC073869.9-201ENST00000641610 120 ntBASIC-1.11□□□□□ -2.59
VPS25Q9BRG1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 RNU6-47P-201ENST00000383866 107 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 RNU6-306P-201ENST00000384617 107 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 MIR196A1-201ENST00000388006 70 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 MIR548O-201ENST00000408583 114 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 AL353193.1-201ENST00000421444 268 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 RNU7-87P-201ENST00000459343 62 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 RNU6-966P-201ENST00000516479 104 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 AP003072.1-201ENST00000531740 145 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 AC108676.2-201ENST00000605225 163 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 AC093726.3-201ENST00000637588 150 ntBASIC-1.12□□□□□ -2.59
VPS25Q9BRG1 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 RNU6-595P-201ENST00000363944 107 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 RNU6-455P-201ENST00000384681 107 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 MTCO2P8-201ENST00000412213 658 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 SNORD42A-201ENST00000459584 64 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 AC011352.1-201ENST00000512300 793 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 RNU7-53P-201ENST00000516705 60 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 RNU7-188P-201ENST00000517063 64 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.13□□□□□ -2.59
VPS25Q9BRG1 RNU6-874P-201ENST00000362390 105 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-961P-201ENST00000363893 105 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU4-75P-201ENST00000364621 146 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-938P-201ENST00000411285 103 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-408P-201ENST00000515910 100 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-758P-201ENST00000516292 89 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 AP003461.1-201ENST00000528866 78 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 AC019193.3-201ENST00000609144 554 ntBASIC-1.14□□□□□ -2.59
VPS25Q9BRG1 RNU6-254P-201ENST00000363377 107 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU6-865P-201ENST00000364772 107 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 SNORA72.3-201ENST00000365074 132 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 MTATP6P17-201ENST00000431030 672 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU7-45P-201ENST00000459460 63 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 AC141846.1-201ENST00000568348 142 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 MIR4636-201ENST00000582271 80 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 AL356055.1-201ENST00000602528 446 ntBASIC-1.15□□□□□ -2.59
VPS25Q9BRG1 RNU6-702P-201ENST00000364982 107 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 SNORA27-201ENST00000384323 126 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 MIR548I3-201ENST00000408378 149 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 MTND3P7-201ENST00000474435 343 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 RPS29P24-201ENST00000486345 171 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 RNU6-138P-201ENST00000515952 107 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 MIR5188-201ENST00000583467 113 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 AC091931.1-201ENST00000623488 728 ntBASIC-1.16□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 SNORD83B-201ENST00000386745 93 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 SNORD41.1-201ENST00000391000 69 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 RNU6-436P-201ENST00000516171 114 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 RNU6-531P-201ENST00000516694 104 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 MIR4273-201ENST00000582824 84 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 MIR4473-201ENST00000583731 91 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 AC124303.1-201ENST00000605703 360 ntBASIC-1.17□□□□□ -2.6
VPS25Q9BRG1 RNA5SP368-201ENST00000364298 116 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 RNU6-522P-201ENST00000364497 107 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms