Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU6-388P-201ENST00000517012 105 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RNU6-389P-201ENST00000517048 105 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RPL23AP91-201ENST00000569211 455 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 MIR4724-201ENST00000579485 89 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 AL513423.1-201ENST00000621695 132 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 MIR367-201ENST00000362299 68 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 SNORD33-201ENST00000362761 85 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 SNORA8.3-201ENST00000384679 139 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNU4-71P-201ENST00000516258 113 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNY3P16-201ENST00000516338 101 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 MIR2681-201ENST00000581814 105 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 JPX_2.1-201ENST00000614161 69 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 AC078938.1-201ENST00000620993 318 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6-969P-201ENST00000383900 105 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR522-201ENST00000385071 87 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR660-201ENST00000385235 97 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR526A2-201ENST00000390198 65 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 SUMO2P16-201ENST00000519475 264 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC100767.1-201ENST00000528178 123 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR4762-201ENST00000585261 75 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6-653P-201ENST00000363074 106 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6-131P-201ENST00000391144 107 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 U8.5-201ENST00000364528 136 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 RNU7-12P-201ENST00000516030 62 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR5688-201ENST00000580619 83 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 AC141273.2-201ENST00000618989 130 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORD50B-201ENST00000364995 70 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RNA5SP496-201ENST00000391240 109 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 MIR1298-201ENST00000408783 112 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC093850.1-201ENST00000454121 251 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORD11-201ENST00000459124 84 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RPS29P1-201ENST00000465274 159 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 COX6CP14-201ENST00000469580 174 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC114811.1-201ENST00000507207 168 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AL049861.1-201ENST00000603130 150 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC009779.6-201ENST00000603972 165 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNU6-923P-201ENST00000364753 107 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNU6-493P-201ENST00000391321 108 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AC130289.1-201ENST00000577321 73 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms