Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNY1P11-201ENST00000363759 113 ntBASIC1.98□□□□□ -2.09
SMOQ99835 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
SMOQ99835 SNORA40.18-201ENST00000391200 128 ntBASIC1.98□□□□□ -2.09
SMOQ99835 SNORA26-201ENST00000391286 122 ntBASIC1.98□□□□□ -2.09
SMOQ99835 SNRPGP14-201ENST00000435400 219 ntBASIC1.98□□□□□ -2.09
SMOQ99835 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.98□□□□□ -2.09
SMOQ99835 AL392103.1-201ENST00000447000 198 ntBASIC1.98□□□□□ -2.09
SMOQ99835 RNA5SP168-201ENST00000516642 112 ntBASIC1.98□□□□□ -2.09
SMOQ99835 RNU6-126P-201ENST00000516685 103 ntBASIC1.98□□□□□ -2.09
SMOQ99835 RNA5SP481-201ENST00000516814 122 ntBASIC1.98□□□□□ -2.09
SMOQ99835 RNU6-295P-201ENST00000516901 104 ntBASIC1.98□□□□□ -2.09
SMOQ99835 MIR4709-201ENST00000577272 72 ntBASIC1.98□□□□□ -2.09
SMOQ99835 Y_RNA.140-201ENST00000363474 103 ntBASIC1.97□□□□□ -2.09
SMOQ99835 SNORD14E-201ENST00000364009 85 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNU6-1082P-201ENST00000364574 107 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNU6-597P-201ENST00000365620 102 ntBASIC1.97□□□□□ -2.09
SMOQ99835 SNORD61-201ENST00000384252 73 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNU6-163P-201ENST00000384396 106 ntBASIC1.97□□□□□ -2.09
SMOQ99835 Y_RNA.488-201ENST00000384403 102 ntBASIC1.97□□□□□ -2.09
SMOQ99835 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNU6-588P-201ENST00000410281 105 ntBASIC1.97□□□□□ -2.09
SMOQ99835 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
SMOQ99835 RNA5SP57-201ENST00000459463 123 ntBASIC1.97□□□□□ -2.09
SMOQ99835 CYCTP-201ENST00000504253 315 ntBASIC1.97□□□□□ -2.09
SMOQ99835 RNA5SP272-201ENST00000516095 111 ntBASIC1.97□□□□□ -2.09
SMOQ99835 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.97□□□□□ -2.09
SMOQ99835 AC007751.1-201ENST00000529260 376 ntBASIC1.97□□□□□ -2.09
SMOQ99835 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.97□□□□□ -2.09
SMOQ99835 MIR6844-201ENST00000637122 62 ntBASIC1.97□□□□□ -2.09
SMOQ99835 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SMOQ99835 RNU6-268P-201ENST00000364174 107 ntBASIC1.96□□□□□ -2.1
SMOQ99835 Y_RNA.226-201ENST00000364337 114 ntBASIC1.96□□□□□ -2.1
SMOQ99835 RNU6-442P-201ENST00000383968 104 ntBASIC1.96□□□□□ -2.1
SMOQ99835 MIR548A2-201ENST00000384956 97 ntBASIC1.96□□□□□ -2.1
SMOQ99835 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
SMOQ99835 MIR569-201ENST00000385228 96 ntBASIC1.96□□□□□ -2.1
SMOQ99835 MIR802-201ENST00000390235 94 ntBASIC1.96□□□□□ -2.1
SMOQ99835 SNORD37.2-201ENST00000391075 66 ntBASIC1.96□□□□□ -2.1
SMOQ99835 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
SMOQ99835 SNORA25.12-201ENST00000516202 82 ntBASIC1.96□□□□□ -2.1
SMOQ99835 RNU6-426P-201ENST00000516464 97 ntBASIC1.96□□□□□ -2.1
SMOQ99835 RNU6-1270P-201ENST00000517128 108 ntBASIC1.96□□□□□ -2.1
SMOQ99835 AC112693.2-201ENST00000556538 232 ntBASIC1.96□□□□□ -2.1
SMOQ99835 MIR3646-201ENST00000578301 84 ntBASIC1.96□□□□□ -2.1
SMOQ99835 AC006441.5-201ENST00000612680 209 ntBASIC1.96□□□□□ -2.1
SMOQ99835 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
SMOQ99835 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMOQ99835 Y_RNA.118-201ENST00000363300 101 ntBASIC1.95□□□□□ -2.1
SMOQ99835 SNORA1-201ENST00000384107 130 ntBASIC1.95□□□□□ -2.1
SMOQ99835 RNU7-197P-201ENST00000458836 62 ntBASIC1.95□□□□□ -2.1
SMOQ99835 RNU6-504P-201ENST00000516568 104 ntBASIC1.95□□□□□ -2.1
SMOQ99835 MIR548X2-201ENST00000579776 100 ntBASIC1.95□□□□□ -2.1
SMOQ99835 AC027279.3-201ENST00000625055 122 ntBASIC1.95□□□□□ -2.1
SMOQ99835 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
SMOQ99835 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMOQ99835 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SMOQ99835 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMOQ99835 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
SMOQ99835 RNU6-199P-201ENST00000362954 107 ntBASIC1.94□□□□□ -2.1
SMOQ99835 RNU6-888P-201ENST00000363010 101 ntBASIC1.94□□□□□ -2.1
SMOQ99835 RNU6-704P-201ENST00000364162 103 ntBASIC1.94□□□□□ -2.1
SMOQ99835 Y_RNA.242-201ENST00000364473 110 ntBASIC1.94□□□□□ -2.1
SMOQ99835 Y_RNA.336-201ENST00000365307 109 ntBASIC1.94□□□□□ -2.1
SMOQ99835 MIR613-201ENST00000385248 95 ntBASIC1.94□□□□□ -2.1
SMOQ99835 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SMOQ99835 SNORA75.5-201ENST00000391291 81 ntBASIC1.94□□□□□ -2.1
SMOQ99835 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
SMOQ99835 MIR548O-201ENST00000408583 114 ntBASIC1.94□□□□□ -2.1
SMOQ99835 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
SMOQ99835 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
SMOQ99835 RNU6-693P-201ENST00000516134 107 ntBASIC1.94□□□□□ -2.1
SMOQ99835 MIR3910-1-201ENST00000580936 111 ntBASIC1.94□□□□□ -2.1
SMOQ99835 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
SMOQ99835 SNORA25.7-201ENST00000364375 127 ntBASIC1.93□□□□□ -2.1
SMOQ99835 SNORD24-201ENST00000383884 75 ntBASIC1.93□□□□□ -2.1
SMOQ99835 Y_RNA.568-201ENST00000384742 113 ntBASIC1.93□□□□□ -2.1
SMOQ99835 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
SMOQ99835 RNU6-360P-201ENST00000390944 104 ntBASIC1.93□□□□□ -2.1
SMOQ99835 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
SMOQ99835 SNRPGP13-201ENST00000442212 177 ntBASIC1.93□□□□□ -2.1
SMOQ99835 HMGN2P32-201ENST00000444648 269 ntBASIC1.93□□□□□ -2.1
SMOQ99835 AC093850.1-201ENST00000454121 251 ntBASIC1.93□□□□□ -2.1
SMOQ99835 RNU7-12P-201ENST00000516030 62 ntBASIC1.93□□□□□ -2.1
SMOQ99835 RNU7-25P-201ENST00000516544 62 ntBASIC1.93□□□□□ -2.1
SMOQ99835 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
SMOQ99835 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
SMOQ99835 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
SMOQ99835 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
SMOQ99835 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SMOQ99835 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SMOQ99835 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.93□□□□□ -2.1
SMOQ99835 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SMOQ99835 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
SMOQ99835 RNU6-833P-201ENST00000363486 107 ntBASIC1.92□□□□□ -2.1
SMOQ99835 Y_RNA.343-201ENST00000365354 112 ntBASIC1.92□□□□□ -2.1
SMOQ99835 SNORD50.2-201ENST00000365465 70 ntBASIC1.92□□□□□ -2.1
SMOQ99835 RNU6-203P-201ENST00000384038 104 ntBASIC1.92□□□□□ -2.1
SMOQ99835 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
SMOQ99835 Y_RNA.497-201ENST00000384447 98 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms