Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.393-201ENST00000383936 102 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RNU6-939P-201ENST00000384634 107 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SCN2AQ99250 MTCO2P33-201ENST00000402100 465 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 RNU6-733P-201ENST00000410759 104 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN2AQ99250 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AC124312.5-201ENST00000604451 268 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 uc_338.4-201ENST00000616635 176 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 AC068647.2-201ENST00000637380 353 ntBASIC0.76□□□□□ -2.29
SCN2AQ99250 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 MIR548A2-201ENST00000384956 97 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 AL590004.1-201ENST00000405321 300 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 RNU7-40P-201ENST00000516397 64 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 RNU6-1137P-201ENST00000517073 99 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.75□□□□□ -2.29
SCN2AQ99250 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
SCN2AQ99250 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SCN2AQ99250 SNORD50B-201ENST00000364995 70 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 Y_RNA.455-201ENST00000384230 98 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA2B-201ENST00000384583 137 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA26.5-201ENST00000391215 123 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN2AQ99250 SCARNA8-201ENST00000515924 131 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 MIR335-201ENST00000362173 94 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 Y_RNA.30-201ENST00000362572 97 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNU4-80P-201ENST00000363200 141 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 Y_RNA.153-201ENST00000363615 91 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA1.2-201ENST00000365189 134 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA24-201ENST00000384096 131 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNU6-763P-201ENST00000390865 106 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA75.2-201ENST00000391138 150 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 SNORA75.3-201ENST00000391231 150 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNU6-693P-201ENST00000516134 107 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNU6-1116P-201ENST00000517269 99 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 AC100767.1-201ENST00000528178 123 ntBASIC0.74□□□□□ -2.29
SCN2AQ99250 RNA5SP257-201ENST00000363023 116 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 U8.7-201ENST00000364940 136 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 Y_RNA.389-201ENST00000383924 113 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 RNU6-484P-201ENST00000384016 107 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 SNORD89-201ENST00000390981 114 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 MIR1252-201ENST00000408861 65 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 RNU6-635P-201ENST00000516651 102 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 RNU6-126P-201ENST00000516685 103 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 AL391516.1-201ENST00000554380 2449 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
SCN2AQ99250 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN2AQ99250 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 SNORA40.15-201ENST00000516884 107 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 Y_RNA.711-201ENST00000516993 102 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU7-181P-201ENST00000517234 74 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU6-988P-201ENST00000519081 107 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 AC020661.2-201ENST00000560114 134 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 PART1_1.1-201ENST00000611761 217 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 MIR6079-201ENST00000635807 62 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU6-396P-201ENST00000365369 105 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU6-1067P-201ENST00000384752 107 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU6-713P-201ENST00000384761 107 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 U8.17-201ENST00000391292 132 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 MIR548O-201ENST00000408583 114 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU2-55P-201ENST00000411146 174 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU6-602P-201ENST00000411155 105 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN2AQ99250 AC023449.1-201ENST00000454464 154 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 RNU7-41P-201ENST00000515917 61 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 SNORA18.4-201ENST00000516440 124 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN2AQ99250 MIR4778-201ENST00000577635 80 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 MIR548AR-201ENST00000582191 57 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 MIR4264-201ENST00000583520 66 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 AL008718.3-201ENST00000610217 321 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 AP001282.2-201ENST00000616149 309 ntBASIC0.72□□□□□ -2.29
SCN2AQ99250 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
SCN2AQ99250 Y_RNA.84-201ENST00000363011 104 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 Y_RNA.216-201ENST00000364205 93 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU6-738P-201ENST00000384531 106 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 MIR606-201ENST00000384851 96 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 ELOCP20-201ENST00000422460 345 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU6-1153P-201ENST00000516760 105 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AC007751.1-201ENST00000529260 376 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AL021707.8-201ENST00000609428 183 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNA5SP48-201ENST00000363969 126 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU6-728P-201ENST00000365375 104 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU4-17P-201ENST00000365598 141 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 SNORA22-201ENST00000383907 134 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 SNORA22C-201ENST00000384614 134 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AC010655.3-201ENST00000478818 450 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 NDUFA4P2-201ENST00000489989 244 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 CYCTP-201ENST00000504253 315 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 RNU6-229P-201ENST00000516614 102 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 SNORD45.4-201ENST00000516629 73 ntBASIC0.71□□□□□ -2.3
SCN2AQ99250 AP003484.1-201ENST00000530974 250 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms