Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SNORA1B-201ENST00000362535 133 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORA70B-201ENST00000384210 135 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-1275P-201ENST00000391087 107 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORA3.2-201ENST00000408221 125 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 AC123900.1-201ENST00000420390 96 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 RPS15AP28-201ENST00000435088 386 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 TRBV12-1-201ENST00000479785 344 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORA4.4-201ENST00000515921 135 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-113P-201ENST00000516653 101 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR1273D-201ENST00000577266 86 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.49-201ENST00000362714 112 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 RNY1P10-201ENST00000363268 113 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORD114-6-201ENST00000364393 72 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORA2.2-201ENST00000365473 135 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR522-201ENST00000385071 87 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU7-123P-201ENST00000515911 60 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-970P-201ENST00000516312 107 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-126P-201ENST00000516685 103 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 SCARNA3-201ENST00000517097 143 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 AC021443.1-201ENST00000604478 211 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDK5RAP1Q96SZ6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU4-16P-201ENST00000364737 141 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 Z98742.3-201ENST00000418637 326 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 MTATP8P2-201ENST00000435212 202 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AL161788.1-201ENST00000441805 169 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AC009238.1-201ENST00000442165 424 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AC009237.6-201ENST00000446969 424 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 RPS26P48-201ENST00000491713 339 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU7-99P-201ENST00000516271 62 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR3945-201ENST00000581853 98 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 MALAT1.1-201ENST00000618249 95 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR6873-201ENST00000622788 63 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR338-201ENST00000636369 67 ntBASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.107-201ENST00000363190 121 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORD68-201ENST00000363214 84 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.298-201ENST00000364960 107 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.544-201ENST00000384650 113 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-938P-201ENST00000411285 103 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 AL606517.2-201ENST00000442855 241 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SKP12-201ENST00000516275 143 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU2-35P-201ENST00000516446 142 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 IGLV3-17-201ENST00000519099 244 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 IGKV3-31-201ENST00000523109 329 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 AP003327.1-201ENST00000529684 127 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDK5RAP1Q96SZ6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 AC018630.2-201ENST00000534866 2403 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.342-201ENST00000365352 113 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 U8.17-201ENST00000391292 132 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU7-164P-201ENST00000459221 62 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-904P-201ENST00000516206 101 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 AC084364.2-201ENST00000546924 395 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 AL513534.2-201ENST00000603836 250 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORD115-40-201ENST00000606510 82 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 AC092881.1-201ENST00000638218 2733 ntBASIC2.35□□□□□ -2.03
CDK5RAP1Q96SZ6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.37-201ENST00000362606 108 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 RNY4P6-201ENST00000363667 96 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.213-201ENST00000364178 111 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 SNRPGP14-201ENST00000435400 219 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-341P-201ENST00000516973 96 ntBASIC2.34□□□□□ -2.03
CDK5RAP1Q96SZ6 AC245060.5-201ENST00000610778 3293 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR342-201ENST00000362212 99 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-268P-201ENST00000364174 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms