Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 RPL39P39-201ENST00000455840 151 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 RNU6-165P-201ENST00000517170 99 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 MIR3149-201ENST00000584629 83 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 AL365265.1-201ENST00000621045 234 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 RNU6-1138P-201ENST00000365359 106 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 Y_RNA.587-201ENST00000391210 103 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC138Q96M89 RNU6-830P-201ENST00000516353 107 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 SNORA74.3-201ENST00000517108 154 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 AC006441.5-201ENST00000612680 209 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 AL442067.1-201ENST00000613261 223 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC138Q96M89 Pinc.1-201ENST00000616452 154 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.58□□□□□ -2.16
CCDC138Q96M89 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC138Q96M89 SNORD27-201ENST00000363981 72 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 Y_RNA.229-201ENST00000364347 113 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 Y_RNA.572-201ENST00000384757 98 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 AC245047.8-201ENST00000456455 284 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 COX6CP14-201ENST00000469580 174 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 SNORD77.4-201ENST00000516158 81 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC138Q96M89 MIR4662B-201ENST00000579498 81 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.57□□□□□ -2.16
CCDC138Q96M89 Y_RNA.20-201ENST00000362479 113 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 Y_RNA.76-201ENST00000362931 109 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 Y_RNA.262-201ENST00000364641 102 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 Y_RNA.292-201ENST00000364904 97 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 RNU6-574P-201ENST00000384265 107 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 RNU6-126P-201ENST00000516685 103 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 AC004817.2-201ENST00000561794 651 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 AL359821.1-201ENST00000605519 182 ntBASIC1.56□□□□□ -2.16
CCDC138Q96M89 RNU6-42P-201ENST00000384165 107 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 Y_RNA.477-201ENST00000384352 108 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 SNORD123-201ENST00000459473 70 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 SNORD116-28-201ENST00000516123 91 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
CCDC138Q96M89 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 RNY3P5-201ENST00000384127 102 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 MIR520C-201ENST00000385005 87 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC138Q96M89 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC138Q96M89 AC005840.1-201ENST00000498412 377 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 MTND1P19-201ENST00000511780 315 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 RN7SKP164-201ENST00000516138 266 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 RNU7-43P-201ENST00000516554 64 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 RNA5SP480-201ENST00000516840 109 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 MIR3128-201ENST00000581957 66 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 AL078603.1-201ENST00000603824 313 ntBASIC1.54□□□□□ -2.16
CCDC138Q96M89 Y_RNA.65-201ENST00000362846 100 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 RNU6-653P-201ENST00000363074 106 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 MIR616-201ENST00000385293 97 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 SNORD58.1-201ENST00000391313 66 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC138Q96M89 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC138Q96M89 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
CCDC138Q96M89 Y_RNA.447-201ENST00000384184 113 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 snosnR66.1-201ENST00000391095 99 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 RNU2-55P-201ENST00000411146 174 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC138Q96M89 RNU6-1023P-201ENST00000516137 106 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 AC011921.3-201ENST00000605540 361 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 AL391903.3-201ENST00000612158 163 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 AC015726.2-201ENST00000620112 122 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 MIR6734-201ENST00000621166 68 ntBASIC1.52□□□□□ -2.17
CCDC138Q96M89 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC138Q96M89 snoU2_19.4-201ENST00000364329 80 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 SNORA20.1-201ENST00000364790 130 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 RNY4P28-201ENST00000365281 93 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 RNU4-17P-201ENST00000365598 141 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 Y_RNA.486-201ENST00000384398 107 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 Y_RNA.539-201ENST00000384635 107 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 RNU6-1228P-201ENST00000391014 107 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC138Q96M89 SNORA31.4-201ENST00000516049 129 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 MIR4764-201ENST00000580680 88 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
CCDC138Q96M89 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCDC138Q96M89 Y_RNA.307-201ENST00000365022 117 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 RNU6-381P-201ENST00000391259 108 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 U8.17-201ENST00000391292 132 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 AC245047.7-201ENST00000440265 293 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 AL133373.1-201ENST00000497098 94 ntBASIC1.5□□□□□ -2.17
CCDC138Q96M89 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms