Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU7-43P-201ENST00000516554 64 ntBASIC1.51□□□□□ -2.17
CCDC136Q96JN2 AL442663.2-201ENST00000554385 511 ntBASIC1.51□□□□□ -2.17
CCDC136Q96JN2 snoU13.31-201ENST00000607291 104 ntBASIC1.51□□□□□ -2.17
CCDC136Q96JN2 RNU6-740P-201ENST00000364734 105 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 Y_RNA.572-201ENST00000384757 98 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 MIR570-201ENST00000384917 97 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 AL591704.2-201ENST00000421658 181 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 RNU7-149P-201ENST00000516739 59 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 MIR548AR-201ENST00000582191 57 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 Pinc.1-201ENST00000616452 154 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 uc_338.4-201ENST00000616635 176 ntBASIC1.5□□□□□ -2.17
CCDC136Q96JN2 Y_RNA.145-201ENST00000363527 102 ntBASIC1.49□□□□□ -2.17
CCDC136Q96JN2 RNU6-738P-201ENST00000384531 106 ntBASIC1.49□□□□□ -2.17
CCDC136Q96JN2 RNU7-181P-201ENST00000517234 74 ntBASIC1.49□□□□□ -2.17
CCDC136Q96JN2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.49□□□□□ -2.17
CCDC136Q96JN2 U2.14-201ENST00000615943 113 ntBASIC1.49□□□□□ -2.17
CCDC136Q96JN2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC136Q96JN2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 Y_RNA.459-201ENST00000384251 102 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 MIR1302-6-201ENST00000408466 90 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC063976.4-201ENST00000421971 163 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC023449.1-201ENST00000454464 154 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 OR2A41P-201ENST00000473586 105 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC136Q96JN2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AL117187.1-201ENST00000555482 181 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 MIR4498-201ENST00000577599 66 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC006006.1-201ENST00000603082 144 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AL360085.1-201ENST00000604713 532 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC006441.5-201ENST00000612680 209 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 Y_RNA.802-201ENST00000614892 130 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.48□□□□□ -2.17
CCDC136Q96JN2 AC008163.1-202ENST00000636004 2889 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 Y_RNA.396-201ENST00000383949 103 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 RNU6-472P-201ENST00000384299 107 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 SNORA80D-201ENST00000384488 135 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 RNA5SP496-201ENST00000391240 109 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AC002429.1-201ENST00000437672 148 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
CCDC136Q96JN2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC136Q96JN2 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.24-201ENST00000362508 103 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 RNA5SP264-201ENST00000363115 107 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 MIR526A2-201ENST00000390198 65 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 U8.17-201ENST00000391292 132 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 RNU7-25P-201ENST00000516544 62 ntBASIC1.46□□□□□ -2.18
CCDC136Q96JN2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC136Q96JN2 MIR1185-1-201ENST00000408598 86 ntBASIC1.45□□□□□ -2.18
CCDC136Q96JN2 UBL5P1-201ENST00000507979 193 ntBASIC1.45□□□□□ -2.18
CCDC136Q96JN2 MTCO2P24-201ENST00000515611 426 ntBASIC1.45□□□□□ -2.18
CCDC136Q96JN2 RNU6-830P-201ENST00000516353 107 ntBASIC1.45□□□□□ -2.18
CCDC136Q96JN2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC136Q96JN2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC136Q96JN2 RNU6-1309P-201ENST00000363305 108 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.176-201ENST00000363815 109 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 RNA5SP48-201ENST00000363969 126 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.587-201ENST00000391210 103 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 RNU7-21P-201ENST00000459430 62 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 SNORD124-201ENST00000459577 104 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC136Q96JN2 AP003716.2-201ENST00000528260 108 ntBASIC1.44□□□□□ -2.18
CCDC136Q96JN2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.47-201ENST00000362697 108 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 SNORA8.3-201ENST00000384679 139 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 SNORD12-201ENST00000391002 90 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 MIR548O-201ENST00000408583 114 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 MRPL35P3-201ENST00000421557 364 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC136Q96JN2 RNU4-57P-201ENST00000515980 135 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 SNORD77.4-201ENST00000516158 81 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.666-201ENST00000516187 112 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 AC100767.1-201ENST00000528178 123 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC136Q96JN2 MIR4251-201ENST00000635819 61 ntBASIC1.43□□□□□ -2.18
CCDC136Q96JN2 MIR335-201ENST00000362173 94 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.229-201ENST00000364347 113 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 SNORA22-201ENST00000383907 134 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 SNORA22C-201ENST00000384614 134 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 RPS29P28-201ENST00000446439 141 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 SNORD2.1-201ENST00000458762 69 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
CCDC136Q96JN2 RNU6-1138P-201ENST00000365359 106 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.486-201ENST00000384398 107 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 AL358176.2-201ENST00000425769 204 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC136Q96JN2 MIR4661-201ENST00000582720 75 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 U6.104-201ENST00000637979 90 ntBASIC1.41□□□□□ -2.18
CCDC136Q96JN2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC136Q96JN2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms