Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNU6-915P-201ENST00000364943 103 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNU6-80P-201ENST00000384195 107 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 MIR520G-201ENST00000385064 90 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP501-201ENST00000410990 112 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.629-201ENST00000411368 105 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNU4-57P-201ENST00000515980 135 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 RNU7-149P-201ENST00000516739 59 ntBASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
VCPIP1Q96JH7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 RNA5SP276-201ENST00000362580 94 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 RNU6-978P-201ENST00000364371 103 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 AC108667.1-201ENST00000428618 249 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 RNA5SP153-201ENST00000516498 76 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 RNU7-128P-201ENST00000517247 62 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 AL160236.1-201ENST00000556317 195 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 U7.2-201ENST00000607576 63 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 AL359075.3-201ENST00000613288 217 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCPIP1Q96JH7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.81-201ENST00000362997 102 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 SNORD20-201ENST00000384550 80 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 MIR562-201ENST00000384894 95 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 RNA5SP323-201ENST00000391094 133 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 RNU1-142P-201ENST00000516682 145 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 AC091178.2-201ENST00000584401 117 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 AL353149.1-201ENST00000610667 244 ntBASIC1.95□□□□□ -2.1
VCPIP1Q96JH7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 SNRPGP10-201ENST00000432323 225 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 RNU7-107P-201ENST00000459121 61 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 MIR5094-201ENST00000578766 85 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 MIR4781-201ENST00000585250 76 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 MIR6079-201ENST00000635807 62 ntBASIC1.94□□□□□ -2.1
VCPIP1Q96JH7 RNU6-235P-201ENST00000362644 107 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 U8.1-201ENST00000362843 134 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.273-201ENST00000364703 102 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.353-201ENST00000365440 108 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.525-201ENST00000384570 113 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 SNORA26-201ENST00000391286 122 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 RNU6-365P-201ENST00000517113 106 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 MIR7111-201ENST00000619751 72 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 U6.108-201ENST00000637764 58 ntBASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
VCPIP1Q96JH7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 AC018630.2-201ENST00000534866 2403 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 MIR1287-201ENST00000408492 90 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 RNU6-659P-201ENST00000516454 104 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 RNU6-341P-201ENST00000516973 96 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 MIR4662B-201ENST00000579498 81 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 AC097639.2-201ENST00000603159 172 ntBASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.92□□□□□ -2.1
VCPIP1Q96JH7 AL391516.1-201ENST00000554380 2449 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 MIR126-201ENST00000362291 85 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 AL163195.1-201ENST00000496941 348 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 AC131055.1-201ENST00000584626 316 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
VCPIP1Q96JH7 ICE2P2-201ENST00000483823 2787 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms