Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 HMGN2P32-201ENST00000444648 269 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 MIR4680-201ENST00000580906 66 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 AC012433.1-201ENST00000588916 398 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 AL442644.1-201ENST00000454390 3105 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
VPS39Q96JC1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 RNU4-10P-201ENST00000364383 140 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 RNU1-93P-201ENST00000364704 169 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 RNU6-442P-201ENST00000383968 104 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 RNA5SP95-201ENST00000410319 137 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 FABP5P4-201ENST00000437203 171 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS39Q96JC1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.77□□□□□ -2.29
VPS39Q96JC1 MIR4452-201ENST00000583004 71 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 Pinc.1-201ENST00000616452 154 ntBASIC0.77□□□□□ -2.29
VPS39Q96JC1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS39Q96JC1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS39Q96JC1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
VPS39Q96JC1 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 RNU6-899P-201ENST00000363947 107 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 U8.17-201ENST00000391292 132 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS39Q96JC1 RNU7-43P-201ENST00000516554 64 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 SNORA40.15-201ENST00000516884 107 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 Y_RNA.721-201ENST00000517207 102 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS39Q96JC1 AC131055.1-201ENST00000584626 316 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 AC015726.2-201ENST00000620112 122 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 AC008133.2-201ENST00000624540 351 ntBASIC0.76□□□□□ -2.29
VPS39Q96JC1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
VPS39Q96JC1 RNU6-797P-201ENST00000363101 109 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 RNU6-290P-201ENST00000365212 101 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 SNORD114-22-201ENST00000365423 72 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 SNORD38C-201ENST00000384381 69 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 MIR802-201ENST00000390235 94 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 BTF3P11-201ENST00000426582 477 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AC091959.1-201ENST00000495857 238 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AC109810.1-201ENST00000534066 224 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AL049861.1-201ENST00000603130 150 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 AC013791.1-201ENST00000616619 62 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 SEPT14P17-201ENST00000617978 177 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 MIR4251-201ENST00000635819 61 ntBASIC0.75□□□□□ -2.29
VPS39Q96JC1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 RNA5SP247-201ENST00000411181 105 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 RNU2-31P-201ENST00000516954 155 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 AC036111.3-201ENST00000526389 112 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS39Q96JC1 MIR2681-201ENST00000581814 105 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 AL512605.2-201ENST00000592972 256 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 AL008718.3-201ENST00000610217 321 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 AC022140.2-201ENST00000623500 188 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 snoU18.1-201ENST00000629629 71 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 MIR6516-201ENST00000630554 81 ntBASIC0.74□□□□□ -2.29
VPS39Q96JC1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS39Q96JC1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS39Q96JC1 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AL035398.1-201ENST00000430869 322 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 MTCYBP6-201ENST00000441810 138 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AL392103.1-201ENST00000447000 198 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 RNU4-57P-201ENST00000515980 135 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 RNU6-830P-201ENST00000516353 107 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 RNU7-25P-201ENST00000516544 62 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AP003733.2-201ENST00000529409 171 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 MIR5692C2-201ENST00000577959 77 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 MIR548AO-201ENST00000579992 96 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AL356055.1-201ENST00000602528 446 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
VPS39Q96JC1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.73□□□□□ -2.29
VPS39Q96JC1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 MIR15B-201ENST00000385045 98 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 AC113618.1-201ENST00000416747 285 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 RNU7-149P-201ENST00000516739 59 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 AC087685.1-201ENST00000587507 141 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 AL355297.3-201ENST00000604082 446 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 484.1 ms