Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.57□□□□□ -2
DDX11Q96FC9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 IGKV1-22-201ENST00000524313 326 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 MIR4679-2-201ENST00000578358 77 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 MIR376A2-201ENST00000636782 80 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
DDX11Q96FC9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DDX11Q96FC9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.56□□□□□ -2
DDX11Q96FC9 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 RNA5SP89-201ENST00000410300 108 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 AL591806.2-201ENST00000433122 173 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 AL163195.1-201ENST00000496941 348 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 RNU1-142P-201ENST00000516682 145 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 RNA5SP137-201ENST00000516833 135 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 AC121758.2-201ENST00000553271 193 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 MIR3169-201ENST00000578032 83 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
DDX11Q96FC9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
DDX11Q96FC9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.55□□□□□ -2
DDX11Q96FC9 RNA5SP493-201ENST00000364115 91 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 FTH1P12-201ENST00000432137 551 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 snoU13.23-201ENST00000458863 104 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
DDX11Q96FC9 AC015712.3-201ENST00000559380 164 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 DEFB122-202ENST00000569013 197 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 AC025166.1-201ENST00000612411 163 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 AC009831.4-201ENST00000620744 325 ntBASIC2.55□□□□□ -2
DDX11Q96FC9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.55□□□□□ -2
DDX11Q96FC9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX11Q96FC9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDX11Q96FC9 MIR126-201ENST00000362291 85 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 SNORA67.3-201ENST00000384366 140 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 SNORA8-201ENST00000384574 139 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MIR515-2-201ENST00000384883 83 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MIR515-1-201ENST00000384884 83 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MIR522-201ENST00000385071 87 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.54□□□□□ -2
DDX11Q96FC9 SCARNA15-202ENST00000516881 127 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 AC024995.1-201ENST00000523014 93 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MIR5002-201ENST00000584713 97 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 AC022217.4-201ENST00000604389 163 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 AL121890.5-201ENST00000620848 304 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 MTND5P18-201ENST00000445624 1801 ntBASIC2.54□□□□□ -2
DDX11Q96FC9 RNU6-880P-201ENST00000384526 107 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 MIR518F-201ENST00000384973 87 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 SNORD23.1-201ENST00000408212 104 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 SNRPGP13-201ENST00000442212 177 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU7-94P-201ENST00000459576 63 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU6-693P-201ENST00000516134 107 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU6-168P-201ENST00000516189 101 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU6-113P-201ENST00000516653 101 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 AP002004.2-201ENST00000531656 154 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
DDX11Q96FC9 RNU6-160P-201ENST00000384591 107 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX11Q96FC9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX11Q96FC9 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 Y_RNA.649-201ENST00000459077 103 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 AC090255.1-201ENST00000495779 349 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 AC108210.2-201ENST00000503681 201 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX11Q96FC9 MIR4529-201ENST00000578110 78 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 MIR4762-201ENST00000585261 75 ntBASIC2.52□□□□□ -2.01
DDX11Q96FC9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX11Q96FC9 SNORD115-3-201ENST00000363100 82 ntBASIC2.51□□□□□ -2.01
DDX11Q96FC9 MIR764-201ENST00000390811 85 ntBASIC2.51□□□□□ -2.01
DDX11Q96FC9 RNA5SP323-201ENST00000391094 133 ntBASIC2.51□□□□□ -2.01
DDX11Q96FC9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX11Q96FC9 AL049830.1-201ENST00000468034 425 ntBASIC2.51□□□□□ -2.01
DDX11Q96FC9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX11Q96FC9 AC008555.8-201ENST00000623602 2168 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX11Q96FC9 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 RNU4-52P-201ENST00000384209 138 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 MIR548A1-201ENST00000385041 97 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX11Q96FC9 RNA5SP200-201ENST00000516360 103 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 MIR5197-201ENST00000583721 112 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 AC006441.5-201ENST00000612680 209 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.5□□□□□ -2.01
DDX11Q96FC9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX11Q96FC9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
DDX11Q96FC9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
DDX11Q96FC9 AL596028.1-201ENST00000326971 197 ntBASIC2.49□□□□□ -2.01
DDX11Q96FC9 MIR450A1-201ENST00000362262 91 ntBASIC2.49□□□□□ -2.01
DDX11Q96FC9 Y_RNA.309-201ENST00000365046 111 ntBASIC2.49□□□□□ -2.01
DDX11Q96FC9 MIR29C-201ENST00000385231 88 ntBASIC2.49□□□□□ -2.01
DDX11Q96FC9 RNA5SP109-201ENST00000391010 116 ntBASIC2.49□□□□□ -2.01
DDX11Q96FC9 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms