Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SNORA2.2-201ENST00000365473 135 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 RNU6-203P-201ENST00000384038 104 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 Y_RNA.435-201ENST00000384095 112 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 RNU6-394P-201ENST00000410735 107 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 CALM2P4-201ENST00000430810 426 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 SNORD45.4-201ENST00000516629 73 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.52□□□□□ -2.01
ZNF428Q96B54 AL160236.1-201ENST00000556317 195 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 AC008507.4-201ENST00000585464 127 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 AC072026.1-201ENST00000605023 201 ntBASIC2.52□□□□□ -2.01
ZNF428Q96B54 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF428Q96B54 Y_RNA.464-201ENST00000384282 110 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 MIR548M-201ENST00000408260 86 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 AL445685.2-201ENST00000422551 342 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 SEPT7P4-201ENST00000437076 306 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF428Q96B54 MIR3144-201ENST00000579460 79 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF428Q96B54 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF428Q96B54 AL513534.2-201ENST00000603836 250 ntBASIC2.51□□□□□ -2.01
ZNF428Q96B54 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF428Q96B54 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF428Q96B54 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
ZNF428Q96B54 RNU6-439P-201ENST00000384188 106 ntBASIC2.5□□□□□ -2.01
ZNF428Q96B54 MIR653-201ENST00000385279 96 ntBASIC2.5□□□□□ -2.01
ZNF428Q96B54 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF428Q96B54 Y_RNA.662-201ENST00000516028 97 ntBASIC2.5□□□□□ -2.01
ZNF428Q96B54 SNORD77.4-201ENST00000516158 81 ntBASIC2.5□□□□□ -2.01
ZNF428Q96B54 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ZNF428Q96B54 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF428Q96B54 AL442644.1-201ENST00000454390 3105 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 MIR302D-201ENST00000362275 68 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 Y_RNA.182-201ENST00000363880 111 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 SNORD38C-201ENST00000384381 69 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 MLLT10P1-201ENST00000418346 262 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 AC079140.2-201ENST00000506193 142 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 RNA5SP182-201ENST00000516064 82 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 MIR3658-201ENST00000636291 56 ntBASIC2.49□□□□□ -2.01
ZNF428Q96B54 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF428Q96B54 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF428Q96B54 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZNF428Q96B54 RNA5SP338-201ENST00000410495 85 ntBASIC2.48□□□□□ -2.01
ZNF428Q96B54 HSPE1P24-201ENST00000450782 238 ntBASIC2.48□□□□□ -2.01
ZNF428Q96B54 RNU7-200P-201ENST00000516105 62 ntBASIC2.48□□□□□ -2.01
ZNF428Q96B54 AC090049.2-201ENST00000550377 109 ntBASIC2.48□□□□□ -2.01
ZNF428Q96B54 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF428Q96B54 AC108706.1-201ENST00000611053 297 ntBASIC2.48□□□□□ -2.01
ZNF428Q96B54 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
ZNF428Q96B54 Y_RNA.7-201ENST00000362352 102 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 Y_RNA.229-201ENST00000364347 113 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 RNA5SP138-201ENST00000365098 114 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 RNU6-746P-201ENST00000384112 109 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 SNORA17.3-201ENST00000391159 129 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF428Q96B54 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF428Q96B54 RPL30P7-201ENST00000479312 323 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 AC114811.1-201ENST00000507207 168 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 RNU6-830P-201ENST00000516353 107 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 RNA5SP153-201ENST00000516498 76 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF428Q96B54 AL357312.1-201ENST00000603879 298 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 AC006441.5-201ENST00000612680 209 ntBASIC2.47□□□□□ -2.01
ZNF428Q96B54 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF428Q96B54 SNORD116-18-201ENST00000383961 92 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 SNORA19-201ENST00000384737 128 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 MIR583-201ENST00000384846 75 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 SNX2P2-201ENST00000424553 323 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 NDUFA4P2-201ENST00000489989 244 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 RPS29P11-201ENST00000496507 171 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF428Q96B54 MIR4448-201ENST00000584360 86 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.46□□□□□ -2.02
ZNF428Q96B54 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF428Q96B54 SNORD50B-201ENST00000364995 70 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 RNA5SP259-201ENST00000365541 109 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 Y_RNA.441-201ENST00000384123 112 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 AC019129.1-201ENST00000403786 261 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 MIR3910-1-201ENST00000580936 111 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 MIR3935-201ENST00000583472 104 ntBASIC2.45□□□□□ -2.02
ZNF428Q96B54 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF428Q96B54 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ZNF428Q96B54 Y_RNA.272-201ENST00000364696 102 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 RNU6-1336P-201ENST00000383886 109 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 MIR136-201ENST00000385207 82 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 AC027119.1-201ENST00000440877 241 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF428Q96B54 RNU6-406P-201ENST00000516470 107 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 Y_RNA.703-201ENST00000516846 111 ntBASIC2.44□□□□□ -2.02
ZNF428Q96B54 SNORD1A-201ENST00000364968 72 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 SUMO2P12-201ENST00000405924 140 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 SNORA79-201ENST00000408376 140 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 RNU4-43P-201ENST00000410628 137 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 RNU7-149P-201ENST00000516739 59 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 MIR4744-201ENST00000581563 82 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 AC095038.3-201ENST00000634439 195 ntBASIC2.43□□□□□ -2.02
ZNF428Q96B54 Y_RNA.75-201ENST00000362927 97 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 RNU6-275P-201ENST00000364910 107 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 RNU6-728P-201ENST00000365375 104 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 Y_RNA.355-201ENST00000365462 98 ntBASIC2.42□□□□□ -2.02
ZNF428Q96B54 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms