Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
BRF1Q92994 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.5□□□□□ -2.01
BRF1Q92994 MIR376A2-201ENST00000636782 80 ntBASIC2.5□□□□□ -2.01
BRF1Q92994 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRF1Q92994 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRF1Q92994 RNU6-476P-201ENST00000384726 107 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 MIRLET7F2-201ENST00000385277 83 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 AL034345.1-201ENST00000407768 123 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 AC114811.1-201ENST00000507207 168 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 IGLV3-17-201ENST00000519099 244 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BRF1Q92994 U1.36-201ENST00000620684 176 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
BRF1Q92994 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BRF1Q92994 Y_RNA.37-201ENST00000362606 108 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 RNU6-1189P-201ENST00000383958 107 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 RNU1-52P-201ENST00000384190 164 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 MIR520A-201ENST00000384862 85 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.48□□□□□ -2.01
BRF1Q92994 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 HSPE1P9-201ENST00000440046 311 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 RNU6-1061P-201ENST00000516530 99 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.48□□□□□ -2.01
BRF1Q92994 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.48□□□□□ -2.01
BRF1Q92994 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
BRF1Q92994 Y_RNA.500-201ENST00000384466 111 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 SNORA3.2-201ENST00000408221 125 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 Y_RNA.630-201ENST00000411370 108 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 AC087499.4-201ENST00000448505 178 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 RNU5E-3P-201ENST00000515913 68 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 RN7SKP19-201ENST00000516016 252 ntBASIC2.47□□□□□ -2.01
BRF1Q92994 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
BRF1Q92994 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
BRF1Q92994 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
BRF1Q92994 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 RNU6-163P-201ENST00000384396 106 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 RNU6-429P-201ENST00000384582 108 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 RNA5SP501-201ENST00000410990 112 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 RNU6-938P-201ENST00000411285 103 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 RNU6-830P-201ENST00000516353 107 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 SNORA31.25-201ENST00000517242 134 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
BRF1Q92994 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.46□□□□□ -2.02
BRF1Q92994 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-833P-201ENST00000363486 107 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-112P-201ENST00000363599 104 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-44P-201ENST00000384045 107 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-424P-201ENST00000384367 105 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 SNORD38C-201ENST00000384381 69 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-296P-201ENST00000384608 107 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-1031P-201ENST00000384773 107 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 AL356320.1-201ENST00000429616 163 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-717P-201ENST00000459076 104 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 SNORA59A-201ENST00000459326 152 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RPS26P48-201ENST00000491713 339 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-781P-201ENST00000516377 101 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 RNU6-1116P-201ENST00000517269 99 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 AC108081.1-201ENST00000604358 221 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 AL590808.1-201ENST00000618696 141 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 AP000553.5-201ENST00000641933 54 ntBASIC2.45□□□□□ -2.02
BRF1Q92994 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
BRF1Q92994 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
BRF1Q92994 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BRF1Q92994 SNORA4.2-201ENST00000365313 147 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 Y_RNA.346-201ENST00000365385 112 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 CALM2P4-201ENST00000430810 426 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 RNA5SP168-201ENST00000516642 112 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 RNA5SP481-201ENST00000516814 122 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 IGKV1-22-201ENST00000524313 326 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 MIR4529-201ENST00000578110 78 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.44□□□□□ -2.02
BRF1Q92994 AC064859.1-201ENST00000624741 174 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 MIR203B-201ENST00000636080 86 ntBASIC2.44□□□□□ -2.02
BRF1Q92994 SNORA2.2-201ENST00000365473 135 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 Y_RNA.440-201ENST00000384120 114 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 U8.16-201ENST00000391279 133 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 RNA5SP508-201ENST00000411327 119 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 SNORD36C-201ENST00000516733 66 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 RNA5SP437-201ENST00000517249 129 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 AP003484.1-201ENST00000530974 250 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 AL670379.3-201ENST00000605040 251 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 AC025166.1-201ENST00000612411 163 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 AC015726.2-201ENST00000620112 122 ntBASIC2.43□□□□□ -2.02
BRF1Q92994 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
BRF1Q92994 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
BRF1Q92994 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms