Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC012493.3-201ENST00000604494 112 ntBASIC2.28□□□□□ -2.04
ERCC4Q92889 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.28□□□□□ -2.04
ERCC4Q92889 snoU2-30.1-201ENST00000365012 70 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 Y_RNA.336-201ENST00000365307 109 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 RNU6-1117P-201ENST00000384525 104 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 RNU6-950P-201ENST00000384651 107 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 RN7SKP200-201ENST00000410564 320 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 SNORD45.4-201ENST00000516629 73 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 AC131055.1-201ENST00000584626 316 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 U1.36-201ENST00000620684 176 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 AC027279.3-201ENST00000625055 122 ntBASIC2.27□□□□□ -2.05
ERCC4Q92889 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.27□□□□□ -2.05
ERCC4Q92889 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ERCC4Q92889 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.27□□□□□ -2.05
ERCC4Q92889 RNU6-268P-201ENST00000364174 107 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 RNU6-1292P-201ENST00000383856 107 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 RNU6-442P-201ENST00000383968 104 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 SNORA1-201ENST00000384107 130 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 MIR518F-201ENST00000384973 87 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 Y_RNA.584-201ENST00000391090 114 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 SNRPGP13-201ENST00000442212 177 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
ERCC4Q92889 AL627230.6-201ENST00000611129 280 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.26□□□□□ -2.05
ERCC4Q92889 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ERCC4Q92889 Y_RNA.120-201ENST00000363304 110 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 SNORD14E-201ENST00000364009 85 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 Y_RNA.291-201ENST00000364886 113 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 RNU6-22P-201ENST00000384355 107 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 RNU6-1031P-201ENST00000384773 107 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 RNA5SP127-201ENST00000411051 133 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 RN7SL274P-201ENST00000492268 272 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 RPL23AP63-201ENST00000498752 471 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.25□□□□□ -2.05
ERCC4Q92889 TUG1_4.1-201ENST00000619464 181 ntBASIC2.25□□□□□ -2.05
ERCC4Q92889 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ERCC4Q92889 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ERCC4Q92889 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ERCC4Q92889 AC092881.1-201ENST00000638218 2733 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 MIR891A-201ENST00000401237 79 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 SUMO2P12-201ENST00000405924 140 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 AL034345.1-201ENST00000407768 123 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 HMGN2P32-201ENST00000444648 269 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 CYCTP-201ENST00000504253 315 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 RNU2-60P-201ENST00000517290 128 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 AP001328.1-201ENST00000528550 176 ntBASIC2.24□□□□□ -2.05
ERCC4Q92889 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.24□□□□□ -2.05
ERCC4Q92889 RNU6-1084P-201ENST00000362498 107 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 RNA5SP276-201ENST00000362580 94 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 Y_RNA.218-201ENST00000364218 104 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 RNU6-915P-201ENST00000364943 103 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 MIR539-201ENST00000365690 78 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.23□□□□□ -2.05
ERCC4Q92889 CALM2P4-201ENST00000430810 426 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.23□□□□□ -2.05
ERCC4Q92889 AC114811.1-201ENST00000507207 168 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
ERCC4Q92889 RNU6-693P-201ENST00000516134 107 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 RNU6-479P-201ENST00000516348 105 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 RNU6-971P-201ENST00000516920 106 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 RNU6-1270P-201ENST00000517128 108 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 U7.2-201ENST00000607576 63 ntBASIC2.23□□□□□ -2.05
ERCC4Q92889 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ERCC4Q92889 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ERCC4Q92889 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ERCC4Q92889 Y_RNA.280-201ENST00000364765 112 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 SNORD77.3-201ENST00000391113 65 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 U8.16-201ENST00000391279 133 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 MIR548O-201ENST00000408583 114 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 AC099513.1-201ENST00000490423 301 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 RNA5SP481-201ENST00000516814 122 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 RNU6-1116P-201ENST00000517269 99 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 MIR3129-201ENST00000581095 76 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.22□□□□□ -2.05
ERCC4Q92889 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ERCC4Q92889 Y_RNA.52-201ENST00000362760 96 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 U8.1-201ENST00000362843 134 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 RNU6-833P-201ENST00000363486 107 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 RNU6-1168P-201ENST00000390831 104 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
ERCC4Q92889 AF228730.3-201ENST00000436691 102 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 SNORA18.4-201ENST00000516440 124 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 Y_RNA.686-201ENST00000516548 134 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 RNA5SP168-201ENST00000516642 112 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
ERCC4Q92889 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.21□□□□□ -2.06
ERCC4Q92889 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ERCC4Q92889 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
ERCC4Q92889 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
ERCC4Q92889 RNU6-1081P-201ENST00000384537 107 ntBASIC2.2□□□□□ -2.06
ERCC4Q92889 Y_RNA.547-201ENST00000384654 119 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms