| ASAP3 | Q8TDY4 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU6-640P-201 | ENST00000363693 | 105 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | SNORA51.5-201 | ENST00000384126 | 131 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU7-164P-201 | ENST00000459221 | 62 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AP001318.4-201 | ENST00000616637 | 121 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC010297.1-201 | ENST00000623948 | 149 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 2.81 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AASDH-207 | ENST00000513376 | 3241 nt | TSL 1 (best) BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | Y_RNA.454-201 | ENST00000384224 | 113 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU6-1104P-201 | ENST00000384723 | 104 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | U8.17-201 | ENST00000391292 | 132 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC008892.1-201 | ENST00000511861 | 384 nt | TSL 3 BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNA5SP137-201 | ENST00000516833 | 135 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | CCPG1-203 | ENST00000442196 | 3453 nt | APPRIS P1 TSL 2 BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | PIK3CA-201 | ENST00000263967 | 9093 nt | APPRIS P1 TSL 2 BASIC | 2.8 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | VPS54-202 | ENST00000354504 | 3594 nt | TSL 1 (best) BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | U8.6-201 | ENST00000364939 | 135 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR1283-2-201 | ENST00000408621 | 87 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR5094-201 | ENST00000578766 | 85 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR4305-201 | ENST00000583252 | 102 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | ZNF117-204 | ENST00000620222 | 5317 nt | APPRIS P1 TSL 1 (best) BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | Z82195.2-201 | ENST00000612348 | 18351 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | DEFA7P-201 | ENST00000382676 | 285 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | SNORA67.4-201 | ENST00000384688 | 142 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR759-201 | ENST00000390224 | 91 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | HMGN2P35-201 | ENST00000412164 | 270 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AL513328.1-201 | ENST00000446460 | 224 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AC074131.1-201 | ENST00000514662 | 253 nt | TSL 2 BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | SNORA31.4-201 | ENST00000516049 | 129 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | RNU2-35P-201 | ENST00000516446 | 142 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR4778-201 | ENST00000577635 | 80 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR5009-201 | ENST00000578736 | 100 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MIR4513-201 | ENST00000581077 | 86 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | DLEU2_5.2-201 | ENST00000610606 | 84 nt | BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.78 | □□□□□ -1.96 | | |
| ASAP3 | Q8TDY4 | AL596211.1-201 | ENST00000569873 | 2277 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNY4P30-201 | ENST00000410216 | 95 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RN7SKP200-201 | ENST00000410564 | 320 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AC068339.1-201 | ENST00000526965 | 141 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AC022523.2-201 | ENST00000561045 | 150 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 2.77 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | VTRNA1-1-201 | ENST00000363120 | 99 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-1113P-201 | ENST00000384348 | 107 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR548D2-201 | ENST00000384955 | 97 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | UBBP3-201 | ENST00000445497 | 241 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-998P-201 | ENST00000515894 | 101 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 2.76 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-34-201 | ENST00000362441 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-12-201 | ENST00000362583 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-29-201 | ENST00000362834 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-9-201 | ENST00000362912 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-21-201 | ENST00000362963 | 81 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-14-201 | ENST00000363090 | 81 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-13-201 | ENST00000363358 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-41-201 | ENST00000363608 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-11-201 | ENST00000363616 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-5-201 | ENST00000363633 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-39-201 | ENST00000363694 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-4-201 | ENST00000363810 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-16-201 | ENST00000363887 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-6-201 | ENST00000363942 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-42-201 | ENST00000364273 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-15-201 | ENST00000364809 | 81 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-1-201 | ENST00000364961 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-26-201 | ENST00000365067 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-10-201 | ENST00000365073 | 81 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-43-201 | ENST00000365503 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-36-201 | ENST00000365629 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |