Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU7-87P-201ENST00000459343 62 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 snoU13.16-201ENST00000459350 104 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-625P-201ENST00000459412 107 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC010486.3-201ENST00000511602 785 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AP000942.4-201ENST00000604811 241 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC018462.2-201ENST00000605375 395 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL121757.2-201ENST00000611223 313 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 SNORA27.1-201ENST00000362604 124 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-407P-201ENST00000365280 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-756P-201ENST00000383997 107 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORD72-201ENST00000390994 80 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNY4P36-201ENST00000391116 96 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR892B-201ENST00000401279 77 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC015818.7-201ENST00000428754 109 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC087499.7-201ENST00000441958 109 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC114755.3-201ENST00000481111 251 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC011352.1-201ENST00000512300 793 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-732P-201ENST00000516033 103 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC073114.1-201ENST00000612027 490 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC091931.1-201ENST00000623488 728 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR3674-201ENST00000636576 68 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNA5SP133-201ENST00000363368 119 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORD87-201ENST00000364849 89 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-652P-201ENST00000365488 107 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR501-201ENST00000390204 84 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR876-201ENST00000401147 81 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-373P-201ENST00000411247 98 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MTATP6P17-201ENST00000431030 672 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU7-129P-201ENST00000516128 62 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-504P-201ENST00000516568 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR4273-201ENST00000582824 84 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 POLR3GP2-201ENST00000588366 668 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC005176.2-201ENST00000596933 147 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC022441.3-201ENST00000605737 136 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC020891.4-201ENST00000605745 93 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AL158209.2-201ENST00000619266 216 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC124864.2-201ENST00000624736 186 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNY1P16-201ENST00000363063 111 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-454P-201ENST00000364292 107 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MTCO3P40-201ENST00000392516 676 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MTND1P2-201ENST00000430604 821 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AP003072.1-201ENST00000531740 145 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU4-20P-201ENST00000365601 151 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR516B1-201ENST00000385211 90 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORA3B-201ENST00000391305 131 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORA26.8-201ENST00000391306 124 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-195P-201ENST00000411352 109 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNRPGP10-201ENST00000432323 225 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SUMO1P3-201ENST00000439961 304 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC109327.2-201ENST00000448339 378 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORA72.3-201ENST00000365074 132 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-847P-201ENST00000411115 108 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC113139.1-201ENST00000605049 239 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR8066-201ENST00000617280 78 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR548AY-201ENST00000617669 107 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC097520.1-201ENST00000624435 385 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AL162726.3-218ENST00000636401 95 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU4-55P-201ENST00000410731 137 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MTND1P11-201ENST00000456661 876 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORD5.1-201ENST00000458800 75 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC091885.1-201ENST00000506658 268 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR4677-201ENST00000584153 80 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 NBR2-204ENST00000587322 63 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC092447.9-201ENST00000603395 144 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC005828.6-201ENST00000606610 232 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 MIR7107-201ENST00000611489 80 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 SNORD114-7-201ENST00000362520 77 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-442P-201ENST00000383968 104 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AL353997.1-201ENST00000432936 108 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 ZNF519P2-201ENST00000557032 169 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC008608.1-201ENST00000603910 127 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 AC011373.1-201ENST00000607270 237 ntBASIC-0.09□□□□□ -2.42
SYNE1Q8NF91 RNU6-740P-201ENST00000364734 105 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 MIR522-201ENST00000385071 87 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 MTCO1P20-201ENST00000425366 358 ntBASIC-0.1□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms