Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 Y_RNA.789-201ENST00000622480 102 ntBASIC1.3□□□□□ -2.2
CPSF7Q8N684 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CPSF7Q8N684 Y_RNA.336-201ENST00000365307 109 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 SNORA8.3-201ENST00000384679 139 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 MIR526A2-201ENST00000390198 65 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 RNA5SP496-201ENST00000391240 109 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 SNORD2.1-201ENST00000458762 69 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.29□□□□□ -2.2
CPSF7Q8N684 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 AC008507.4-201ENST00000585464 127 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 7SK.10-201ENST00000621414 298 ntBASIC1.29□□□□□ -2.2
CPSF7Q8N684 RNU6-702P-201ENST00000364982 107 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 RNU6-574P-201ENST00000384265 107 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 Y_RNA.562-201ENST00000384695 113 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 MIR516B2-201ENST00000385190 85 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF7Q8N684 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 MIR4452-201ENST00000583004 71 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 AL049861.1-201ENST00000603130 150 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 AC062037.2-201ENST00000610137 73 ntBASIC1.28□□□□□ -2.2
CPSF7Q8N684 Y_RNA.24-201ENST00000362508 103 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 Y_RNA.144-201ENST00000363521 113 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 RNU6-463P-201ENST00000384340 107 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 Y_RNA.477-201ENST00000384352 108 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 SNORD41-201ENST00000386967 70 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CPSF7Q8N684 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF7Q8N684 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF7Q8N684 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR4643-201ENST00000577473 78 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR5688-201ENST00000580619 83 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR4282-201ENST00000583613 67 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR3149-201ENST00000584629 83 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 BX284668.6-201ENST00000606899 438 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 GHRLOS.1-201ENST00000610995 70 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 uc_338.4-201ENST00000616635 176 ntBASIC1.27□□□□□ -2.21
CPSF7Q8N684 SNORD27-201ENST00000363981 72 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 Y_RNA.242-201ENST00000364473 110 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 Y_RNA.350-201ENST00000365409 98 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 Y_RNA.416-201ENST00000384014 113 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 Y_RNA.452-201ENST00000384202 108 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 SNORD72-201ENST00000390994 80 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.26□□□□□ -2.21
CPSF7Q8N684 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.26□□□□□ -2.21
CPSF7Q8N684 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 AC100767.1-201ENST00000528178 123 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CPSF7Q8N684 AL021707.8-201ENST00000609428 183 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
CPSF7Q8N684 Y_RNA.193-201ENST00000363979 102 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 SNORD38C-201ENST00000384381 69 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 Y_RNA.572-201ENST00000384757 98 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 MIR626-201ENST00000385032 94 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.25□□□□□ -2.21
CPSF7Q8N684 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 RNU7-149P-201ENST00000516739 59 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 AL357312.1-201ENST00000603879 298 ntBASIC1.25□□□□□ -2.21
CPSF7Q8N684 Y_RNA.76-201ENST00000362931 109 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 RNU6-268P-201ENST00000364174 107 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 Y_RNA.304-201ENST00000365011 112 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 MIR15B-201ENST00000385045 98 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 SNORD116-28-201ENST00000516123 91 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 AL442067.1-201ENST00000613261 223 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 AL365265.1-201ENST00000621045 234 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 AC091895.1-201ENST00000624494 256 ntBASIC1.24□□□□□ -2.21
CPSF7Q8N684 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
CPSF7Q8N684 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CPSF7Q8N684 Y_RNA.229-201ENST00000364347 113 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 RNU6-42P-201ENST00000384165 107 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 snosnR66.1-201ENST00000391095 99 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 AC245047.8-201ENST00000456455 284 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 RNU6-165P-201ENST00000517170 99 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 MIR3128-201ENST00000581957 66 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 AL078603.1-201ENST00000603824 313 ntBASIC1.23□□□□□ -2.21
CPSF7Q8N684 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CPSF7Q8N684 Y_RNA.65-201ENST00000362846 100 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 Y_RNA.262-201ENST00000364641 102 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 Y_RNA.292-201ENST00000364904 97 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 Y_RNA.478-201ENST00000384358 107 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF7Q8N684 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 MTND1P19-201ENST00000511780 315 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
CPSF7Q8N684 SNORD77.4-201ENST00000516158 81 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms