| STAG2 | Q8N3U4 | RNU7-123P-201 | ENST00000515911 | 60 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | RNU6-830P-201 | ENST00000516353 | 107 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | OR4K2-204 | ENST00000641885 | 8681 nt | APPRIS P1 BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AP003174.1-201 | ENST00000306533 | 376 nt | TSL 2 BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | Y_RNA.323-201 | ENST00000365157 | 109 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | MIR196B-201 | ENST00000384852 | 84 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AC022513.1-201 | ENST00000624512 | 117 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | PCDH11Y-201 | ENST00000215473 | 4595 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | U8.6-201 | ENST00000364939 | 135 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AL035398.1-201 | ENST00000430869 | 322 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | SNORA40.13-201 | ENST00000516379 | 120 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AC068339.1-201 | ENST00000526965 | 141 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | MIR3163-201 | ENST00000581592 | 73 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 3.03 | □□□□□ -1.92 | | |
| STAG2 | Q8N3U4 | SENP7-205 | ENST00000394091 | 4434 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNA5SP68-201 | ENST00000363885 | 119 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SNORA51.10-201 | ENST00000384418 | 136 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SNORA31.10-201 | ENST00000516482 | 106 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC022523.2-201 | ENST00000561045 | 150 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR5009-201 | ENST00000578736 | 100 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU6-94P-201 | ENST00000607728 | 107 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AP001318.4-201 | ENST00000616637 | 121 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC027279.3-201 | ENST00000625055 | 122 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | LCOR-205 | ENST00000421806 | 16004 nt | TSL 3 BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | Y_RNA.348-201 | ENST00000365403 | 103 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU6-905P-201 | ENST00000384434 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | Y_RNA.544-201 | ENST00000384650 | 113 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MT-TI-201 | ENST00000387365 | 69 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | KRTAP19-11P-201 | ENST00000439851 | 104 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC141557.1-201 | ENST00000540982 | 400 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | FTX-214 | ENST00000638437 | 12267 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | TANK-201 | ENST00000259075 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU6-1104P-201 | ENST00000384723 | 104 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR548D2-201 | ENST00000384955 | 97 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNA5SP210-201 | ENST00000391034 | 120 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR6817-201 | ENST00000615588 | 66 nt | BASIC | 3 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RPL39P25-201 | ENST00000449384 | 154 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR3683-201 | ENST00000580847 | 82 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | WDR3-201 | ENST00000349139 | 9974 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR449A-201 | ENST00000362113 | 91 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU2-35P-201 | ENST00000516446 | 142 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SPTSSB-205 | ENST00000620149 | 231 nt | APPRIS P1 BASIC | 2.98 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SYTL2-230 | ENST00000634661 | 6672 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU6-1131P-201 | ENST00000364955 | 107 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU1-138P-201 | ENST00000384093 | 164 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | RNU7-96P-201 | ENST00000459535 | 64 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | IGLV3-17-201 | ENST00000519099 | 244 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | MIR4446-201 | ENST00000578505 | 67 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| STAG2 | Q8N3U4 | SNORD115-34-201 | ENST00000362441 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-12-201 | ENST00000362583 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-29-201 | ENST00000362834 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-9-201 | ENST00000362912 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-21-201 | ENST00000362963 | 81 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-14-201 | ENST00000363090 | 81 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-13-201 | ENST00000363358 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | RNA5SP393-201 | ENST00000363423 | 117 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-41-201 | ENST00000363608 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-11-201 | ENST00000363616 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |
| STAG2 | Q8N3U4 | SNORD115-5-201 | ENST00000363633 | 82 nt | BASIC | 2.96 | □□□□□ -1.94 | | |