Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNY3P5-201ENST00000384127 102 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 MIR616-201ENST00000385293 97 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.4□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 RNU6-126P-201ENST00000516685 103 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 RNU7-149P-201ENST00000516739 59 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 MIR4662B-201ENST00000579498 81 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
BEST3Q8N1M1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RNU6-379P-201ENST00000363813 104 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 SNORD72-201ENST00000390994 80 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 AL451046.2-201ENST00000403074 277 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RN7SKP164-201ENST00000516138 266 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 SNORD77.4-201ENST00000516158 81 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RNU6-917P-201ENST00000516294 104 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 AL391903.3-201ENST00000612158 163 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 Pinc.1-201ENST00000616452 154 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.39□□□□□ -2.19
BEST3Q8N1M1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
BEST3Q8N1M1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
BEST3Q8N1M1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
BEST3Q8N1M1 RNU6-103P-201ENST00000363686 107 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 MIR15B-201ENST00000385045 98 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 MIR136-201ENST00000385207 82 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 RNU6-381P-201ENST00000391259 108 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 RNU2-55P-201ENST00000411146 174 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 SNRPGP14-201ENST00000435400 219 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 AC245047.8-201ENST00000456455 284 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 AC141273.2-201ENST00000618989 130 ntBASIC1.38□□□□□ -2.19
BEST3Q8N1M1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
BEST3Q8N1M1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
BEST3Q8N1M1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.200-201ENST00000364018 102 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 RNU6-268P-201ENST00000364174 107 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 RNU6-321P-201ENST00000410912 106 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AC090142.3-201ENST00000519012 385 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AC009779.6-201ENST00000603972 165 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AC006441.5-201ENST00000612680 209 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AL121890.5-201ENST00000620848 304 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
BEST3Q8N1M1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
BEST3Q8N1M1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 MT-TT-201ENST00000387460 66 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 AL606845.1-201ENST00000404881 255 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 SCARNA8-201ENST00000515924 131 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 RNY3P16-201ENST00000516338 101 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 RNU6-453P-201ENST00000516819 85 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.36□□□□□ -2.19
BEST3Q8N1M1 AL442644.1-201ENST00000454390 3105 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.83-201ENST00000363005 113 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 SNORA26-201ENST00000391286 122 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
BEST3Q8N1M1 AC005840.1-201ENST00000498412 377 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 RNU6-830P-201ENST00000516353 107 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
BEST3Q8N1M1 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 MIR3664-201ENST00000579074 99 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 MIR4781-201ENST00000585250 76 ntBASIC1.35□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 SNORD41-201ENST00000386967 70 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 RNU6-493P-201ENST00000391321 108 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 RNU6-388P-201ENST00000517012 105 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 RNU6-389P-201ENST00000517048 105 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.34□□□□□ -2.19
BEST3Q8N1M1 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 Z83818.1-201ENST00000603584 150 ntBASIC1.34□□□□□ -2.19
BEST3Q8N1M1 MIR411-201ENST00000362239 96 ntBASIC1.33□□□□□ -2.2
BEST3Q8N1M1 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms