Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SCARNA8-201ENST00000515924 131 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RNU7-12P-201ENST00000516030 62 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RN7SKP164-201ENST00000516138 266 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 SNORD77.4-201ENST00000516158 81 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RNY3P16-201ENST00000516338 101 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 MIR3671-201ENST00000580455 88 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 MIR4422-201ENST00000581938 83 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS52Q8N1B4 SNORA7.1-201ENST00000363750 139 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.274-201ENST00000364714 101 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 RNU6-163P-201ENST00000384396 106 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 MIR513A1-201ENST00000385138 129 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 MIR891A-201ENST00000401237 79 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 HMGN2P32-201ENST00000444648 269 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 AC023449.1-201ENST00000454464 154 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 AC245047.8-201ENST00000456455 284 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 snoU13.9-201ENST00000458927 103 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS52Q8N1B4 MIR4308-201ENST00000580634 81 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 AL049861.1-201ENST00000603130 150 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 Z83818.1-201ENST00000603584 150 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 ZNF209P-201ENST00000593450 2304 ntBASIC1.64□□□□□ -2.15
VPS52Q8N1B4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS52Q8N1B4 ICE2P2-201ENST00000483823 2787 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 RNU6-103P-201ENST00000363686 107 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 RNU6-200P-201ENST00000364743 107 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 PIGPP3-201ENST00000425307 415 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 SNRPGP14-201ENST00000435400 219 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS52Q8N1B4 MIR7111-201ENST00000619751 72 ntBASIC1.63□□□□□ -2.15
VPS52Q8N1B4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS52Q8N1B4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 SNORD72-201ENST00000390994 80 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 RNU6-918P-201ENST00000391219 106 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 RNU2-55P-201ENST00000411146 174 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS52Q8N1B4 RNU7-149P-201ENST00000516739 59 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 RNU6-453P-201ENST00000516819 85 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 RNU6-794P-201ENST00000517261 64 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 MIR4778-201ENST00000577635 80 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 MIR4421-201ENST00000578133 69 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
VPS52Q8N1B4 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 RNU6-199P-201ENST00000362954 107 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 RNU6-392P-201ENST00000364926 101 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 MIR653-201ENST00000385279 96 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 MT-TT-201ENST00000387460 66 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 RNU6-493P-201ENST00000391321 108 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 AC093850.1-201ENST00000454121 251 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 RNU6-138P-201ENST00000515952 107 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 MIR4662B-201ENST00000579498 81 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.61□□□□□ -2.15
VPS52Q8N1B4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
VPS52Q8N1B4 SNORD14E-201ENST00000364009 85 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 RNU6-923P-201ENST00000364753 107 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 SNORD1A-201ENST00000364968 72 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 RNU6-442P-201ENST00000383968 104 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 MIR452-201ENST00000385020 85 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 AL606845.1-201ENST00000404881 255 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 RNU6-126P-201ENST00000516685 103 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS52Q8N1B4 AC006441.5-201ENST00000612680 209 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
VPS52Q8N1B4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS52Q8N1B4 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.297-201ENST00000364950 91 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 RNU6-1318P-201ENST00000365389 103 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 RNU6-484P-201ENST00000384016 107 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 MIR526A1-201ENST00000384897 85 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.59□□□□□ -2.15
VPS52Q8N1B4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.59□□□□□ -2.15
VPS52Q8N1B4 MIR4744-201ENST00000581563 82 ntBASIC1.59□□□□□ -2.15
VPS52Q8N1B4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VPS52Q8N1B4 RNU6-268P-201ENST00000364174 107 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 SNORA2.2-201ENST00000365473 135 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 RNA5SP259-201ENST00000365541 109 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 RNU6-47P-201ENST00000383866 107 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
VPS52Q8N1B4 Y_RNA.644-201ENST00000459006 113 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms