Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 Pinc.1-201ENST00000616452 154 ntBASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.16-201ENST00000362421 102 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 RNU6-1227P-201ENST00000383981 107 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 RNU6-662P-201ENST00000384253 104 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AL731563.1-201ENST00000442202 214 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 RNU6-830P-201ENST00000516353 107 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 MIR5692C2-201ENST00000577959 77 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 MIR548AR-201ENST00000582191 57 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 SNORD28B-201ENST00000390993 75 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 U8.17-201ENST00000391292 132 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 MTND5P22-201ENST00000458380 195 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 SNORA27.4-201ENST00000516650 95 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 MIR4452-201ENST00000583004 71 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AC015726.2-201ENST00000620112 122 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AC008133.2-201ENST00000624540 351 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
C9orf40Q8IXQ3 MIR367-201ENST00000362299 68 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.293-201ENST00000364908 93 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 MIR1185-1-201ENST00000408598 86 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 RN7SKP164-201ENST00000516138 266 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 MIR4724-201ENST00000579485 89 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 SEPT14P17-201ENST00000617978 177 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 AC022140.2-201ENST00000623500 188 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 MIR4251-201ENST00000635819 61 ntBASIC0.78□□□□□ -2.28
C9orf40Q8IXQ3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 RNA5SP496-201ENST00000391240 109 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 AC113618.1-201ENST00000416747 285 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 SERF1AP1-201ENST00000514575 187 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 RNU7-181P-201ENST00000517234 74 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 AL021707.8-201ENST00000609428 183 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 uc_338.4-201ENST00000616635 176 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 snoU18.1-201ENST00000629629 71 ntBASIC0.77□□□□□ -2.29
C9orf40Q8IXQ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 MIR570-201ENST00000384917 97 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 RNA5SP247-201ENST00000411181 105 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 RPS29P1-201ENST00000465274 159 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 RNU7-149P-201ENST00000516739 59 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-570P-201ENST00000517051 105 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 AL049861.1-201ENST00000603130 150 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 AL008718.3-201ENST00000610217 321 ntBASIC0.76□□□□□ -2.29
C9orf40Q8IXQ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 UBE2WP1-201ENST00000362030 340 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 SNORA1.2-201ENST00000365189 134 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 MIR1287-201ENST00000408492 90 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 RNU4-57P-201ENST00000515980 135 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 RNU11-2P-201ENST00000516898 142 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
C9orf40Q8IXQ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 SNORA51.10-201ENST00000384418 136 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-713P-201ENST00000384761 107 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 AP003072.1-201ENST00000531740 145 ntBASIC0.74□□□□□ -2.29
C9orf40Q8IXQ3 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms