Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.85□□□□□ -1.95
NPAS4Q8IUM7 MIR148B-201ENST00000362252 99 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 Y_RNA.163-201ENST00000363702 113 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 RNU6-240P-201ENST00000516098 97 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 RNU6-113P-201ENST00000516653 101 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 AL035470.1-201ENST00000622571 220 ntBASIC2.84□□□□□ -1.95
NPAS4Q8IUM7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 RNU6-766P-201ENST00000362478 107 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 RNU6-640P-201ENST00000363693 105 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 SNORD73B-201ENST00000364394 72 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 Y_RNA.328-201ENST00000365208 113 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 SNORA51.5-201ENST00000384126 131 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 SNORA51.10-201ENST00000384418 136 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 MIR518F-201ENST00000384973 87 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 SNRPGP13-201ENST00000442212 177 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 snoU13.27-201ENST00000459278 104 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP57-201ENST00000459463 123 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 AC055731.1-201ENST00000474387 401 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 AP004217.1-201ENST00000480579 346 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 COX6CP6-201ENST00000490840 228 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 AP001318.4-201ENST00000616637 121 ntBASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NPAS4Q8IUM7 AC093831.2-201ENST00000624393 3427 ntBASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 SNORA63.5-201ENST00000363548 123 ntBASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 RNU6-163P-201ENST00000384396 106 ntBASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 MIR4635-201ENST00000583759 79 ntBASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPAS4Q8IUM7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 U8.6-201ENST00000364939 135 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 RNU6-1014P-201ENST00000383940 103 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 MIR1302-5-201ENST00000408164 150 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP320-201ENST00000516263 124 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 MIR4446-201ENST00000578505 67 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 MIR4287-201ENST00000579398 78 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NPAS4Q8IUM7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RNU6-296P-201ENST00000384608 107 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 HSPE1P9-201ENST00000440046 311 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RPL39P34-201ENST00000477141 156 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 SNORA31.10-201ENST00000516482 106 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 SNORD45.4-201ENST00000516629 73 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP437-201ENST00000517249 129 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 AC027279.3-201ENST00000625055 122 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 ZNF658B-202ENST00000615961 3375 ntBASIC2.8□□□□□ -1.96
NPAS4Q8IUM7 ICE2P2-201ENST00000483823 2787 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 RNU6-1131P-201ENST00000364955 107 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 RNU6-294P-201ENST00000364999 102 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 SNORA3.2-201ENST00000408221 125 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 MIR5197-201ENST00000583721 112 ntBASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS4Q8IUM7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP432-201ENST00000362480 116 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 U8.2-201ENST00000363156 134 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RNU6-49P-201ENST00000384256 107 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 SNORA80E-201ENST00000384744 137 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 MIR1302-4-201ENST00000408701 150 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP100-201ENST00000410903 110 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RNA5SP59-201ENST00000410922 110 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RPS26P48-201ENST00000491713 339 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 RNY4P20-201ENST00000516678 93 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.78□□□□□ -1.96
NPAS4Q8IUM7 AL589743.1-201ENST00000551932 2712 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP289-201ENST00000362332 137 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.198-201ENST00000364013 98 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 SNORA4.2-201ENST00000365313 147 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 SNORA2.2-201ENST00000365473 135 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 SNORA6-201ENST00000384033 151 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 MT-TI-201ENST00000387365 69 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP212-201ENST00000391223 107 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 MIR548O-201ENST00000408583 114 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 RN7SKP192-201ENST00000411291 327 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 RNU6-844P-201ENST00000517175 102 ntBASIC2.77□□□□□ -1.97
NPAS4Q8IUM7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms