Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-767P-201ENST00000384132 107 ntBASIC-2.41□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.514-201ENST00000384528 112 ntBASIC-2.41□□□□□ -2.8
LINC00643Q86TS7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.41□□□□□ -2.8
LINC00643Q86TS7 AC026421.1-201ENST00000519101 163 ntBASIC-2.41□□□□□ -2.8
LINC00643Q86TS7 MIR7844-201ENST00000616161 122 ntBASIC-2.41□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.97-201ENST00000363094 102 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 RNU6-454P-201ENST00000364292 107 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 RNU6-1029P-201ENST00000384109 107 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 RNU6-606P-201ENST00000384721 111 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 DLGAP5P1-201ENST00000430307 464 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 RPL30P15-201ENST00000457129 321 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 MIR3920-201ENST00000581751 86 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 AC145423.2-201ENST00000610631 239 ntBASIC-2.42□□□□□ -2.8
LINC00643Q86TS7 MIR410-201ENST00000362222 80 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 MIR548I3-201ENST00000408378 149 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 SNORD18.2-201ENST00000459604 70 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 RNU7-25P-201ENST00000516544 62 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 RNU6-334P-201ENST00000517072 102 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 AC013244.3-201ENST00000605614 388 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 MIR8068-201ENST00000618032 68 ntBASIC-2.43□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.30-201ENST00000362572 97 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 RNU6-35P-201ENST00000384530 107 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 SNORD72-201ENST00000390994 80 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 AC244090.1-201ENST00000441884 93 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 AC104576.1-201ENST00000524225 88 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 MIR5591-201ENST00000578248 65 ntBASIC-2.44□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.329-201ENST00000365209 107 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 RNU6-413P-201ENST00000384115 107 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 RNU6-456P-201ENST00000384493 107 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 SNORA40.5-201ENST00000391061 128 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 AL603910.2-201ENST00000407268 136 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 AC016907.1-201ENST00000419483 435 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 POLR3GP2-201ENST00000588366 668 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 U2.17-201ENST00000611454 95 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 uc_338.11-201ENST00000619132 160 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 SEPT14P19-203ENST00000633205 211 ntBASIC-2.45□□□□□ -2.8
LINC00643Q86TS7 RNU6-597P-201ENST00000365620 102 ntBASIC-2.46□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.377-201ENST00000365644 108 ntBASIC-2.46□□□□□ -2.8
LINC00643Q86TS7 AL442663.2-201ENST00000554385 511 ntBASIC-2.46□□□□□ -2.8
LINC00643Q86TS7 SNORD50.1-201ENST00000362987 71 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 RNU6-653P-201ENST00000363074 106 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.242-201ENST00000364473 110 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 SNORA27-201ENST00000384323 126 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 RNU6-905P-201ENST00000384434 107 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 RPS27AP14-201ENST00000422868 454 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 AL353813.1-201ENST00000440700 253 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 AC055872.1-201ENST00000570978 278 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 MIR4320-201ENST00000636981 65 ntBASIC-2.47□□□□□ -2.8
LINC00643Q86TS7 Y_RNA.172-201ENST00000363765 102 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 Y_RNA.203-201ENST00000364106 102 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 RNU6-169P-201ENST00000365336 107 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 SNORA69-201ENST00000383895 132 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 MIR4703-201ENST00000577728 79 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 MIR4770-201ENST00000579149 58 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 CPDP1-201ENST00000579660 283 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 AC124312.5-201ENST00000604451 268 ntBASIC-2.48□□□□□ -2.81
LINC00643Q86TS7 RNU4-32P-201ENST00000363404 141 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 SNORD114-17-201ENST00000364699 75 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 RNU6-533P-201ENST00000384144 107 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 SNORA49-201ENST00000386157 136 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 SNORD77.3-201ENST00000391113 65 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 RNU6-1203P-201ENST00000410703 110 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 RNU7-13P-201ENST00000516413 62 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 AL137161.1-201ENST00000532231 390 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 MIR548H5-201ENST00000580314 60 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 MIR6717-201ENST00000622747 73 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.49□□□□□ -2.81
LINC00643Q86TS7 RNU6-1209P-201ENST00000363655 107 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 RNU6-281P-201ENST00000384212 103 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 MIR599-201ENST00000385069 95 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 AC016550.1-201ENST00000505348 785 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 RNU6-410P-201ENST00000517006 107 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 AC134698.4-201ENST00000523451 826 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 AC087752.4-201ENST00000605911 462 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 AC092807.2-201ENST00000609367 243 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 AL158063.1-201ENST00000615349 536 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 MIR3674-201ENST00000636576 68 ntBASIC-2.5□□□□□ -2.81
LINC00643Q86TS7 RNA5SP133-201ENST00000363368 119 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 RNU6-1329P-201ENST00000365664 107 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 MIR548O-201ENST00000408583 114 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 RNU6-588P-201ENST00000410281 105 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 AC098614.3-201ENST00000438957 440 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 AC093423.1-201ENST00000440817 142 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 RNU6-1012P-201ENST00000516606 109 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 MTND5P40-201ENST00000559945 246 ntBASIC-2.51□□□□□ -2.81
LINC00643Q86TS7 RNU6-449P-201ENST00000383914 107 ntBASIC-2.52□□□□□ -2.81
LINC00643Q86TS7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-2.52□□□□□ -2.81
LINC00643Q86TS7 SNORD27.1-201ENST00000516319 72 ntBASIC-2.52□□□□□ -2.81
LINC00643Q86TS7 MIR4460-201ENST00000577862 86 ntBASIC-2.52□□□□□ -2.81
LINC00643Q86TS7 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms