Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 MIR1267-201ENST00000408723 78 ntBASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 MIR1298-201ENST00000408783 112 ntBASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.89□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-200P-201ENST00000364743 107 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 RPL30P13-201ENST00000418873 348 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 CALM2P4-201ENST00000430810 426 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 AC108059.2-201ENST00000434626 151 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 SNORD11-201ENST00000459124 84 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-1007P-201ENST00000516586 107 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 RNA5SP168-201ENST00000516642 112 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRT28Q7Z3Y7 ICE2P2-201ENST00000483823 2787 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 MIRLET7C-201ENST00000362160 84 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 MIR411-201ENST00000362239 96 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-1318P-201ENST00000365389 103 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-163P-201ENST00000384396 106 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 MIR194-1-201ENST00000384892 85 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 MIR802-201ENST00000390235 94 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNA5SP496-201ENST00000391240 109 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-381P-201ENST00000391259 108 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 PGBD4P5-201ENST00000445958 426 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNU7-12P-201ENST00000516030 62 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 SNORD3E-202ENST00000627253 216 ntBASIC1.87□□□□□ -2.11
KRT28Q7Z3Y7 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-203P-201ENST00000384038 104 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 MIR520E-201ENST00000384867 87 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 MIR522-201ENST00000385071 87 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 U8.16-201ENST00000391279 133 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 RPS29P1-201ENST00000465274 159 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 AC023790.1-201ENST00000482174 347 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 RNY3P16-201ENST00000516338 101 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 AL513423.1-201ENST00000621695 132 ntBASIC1.86□□□□□ -2.11
KRT28Q7Z3Y7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.83-201ENST00000363005 113 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.785-201ENST00000384290 109 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-424P-201ENST00000384367 105 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 PIGPP3-201ENST00000425307 415 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 AC004223.1-201ENST00000479840 271 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 MIR4308-201ENST00000580634 81 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 MIR3660-201ENST00000584845 100 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 AC120024.3-201ENST00000603167 156 ntBASIC1.85□□□□□ -2.11
KRT28Q7Z3Y7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 SNORD114-27-201ENST00000363766 70 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-923P-201ENST00000364753 107 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 RNU4-17P-201ENST00000365598 141 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-493P-201ENST00000391321 108 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 RNU6-138P-201ENST00000515952 107 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 MIR4778-201ENST00000577635 80 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 AL049861.1-201ENST00000603130 150 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 Z83818.1-201ENST00000603584 150 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 AC090425.1-201ENST00000610007 140 ntBASIC1.84□□□□□ -2.11
KRT28Q7Z3Y7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 MIR616-201ENST00000385293 97 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 RNU6-918P-201ENST00000391219 106 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 AC245047.8-201ENST00000456455 284 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 AC114811.1-201ENST00000507207 168 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 SNORD45.4-201ENST00000516629 73 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 AC087685.1-201ENST00000587507 141 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 AL391903.3-201ENST00000612158 163 ntBASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRT28Q7Z3Y7 SNORD14E-201ENST00000364009 85 ntBASIC1.82□□□□□ -2.12
KRT28Q7Z3Y7 RNA5SP259-201ENST00000365541 109 ntBASIC1.82□□□□□ -2.12
KRT28Q7Z3Y7 MIR660-201ENST00000385235 97 ntBASIC1.82□□□□□ -2.12
KRT28Q7Z3Y7 SNORA40.6-201ENST00000391153 128 ntBASIC1.82□□□□□ -2.12
KRT28Q7Z3Y7 MIR891A-201ENST00000401237 79 ntBASIC1.82□□□□□ -2.12
KRT28Q7Z3Y7 SCARNA8-201ENST00000515924 131 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms