Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SNORA74.3-201ENST00000517108 154 ntBASIC1.12□□□□□ -2.23
CTR9Q6PD62 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
CTR9Q6PD62 Y_RNA.145-201ENST00000363527 102 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 SNORD14E-201ENST00000364009 85 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 MT-TW-201ENST00000387382 68 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 AC245047.7-201ENST00000440265 293 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 TRBVB-201ENST00000477100 408 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 Y_RNA.673-201ENST00000516306 88 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 SNORD111.1-201ENST00000516421 86 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 AL021707.8-201ENST00000609428 183 ntBASIC1.11□□□□□ -2.23
CTR9Q6PD62 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
CTR9Q6PD62 RNU6-238P-201ENST00000363313 106 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 Y_RNA.237-201ENST00000364439 102 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 Y_RNA.275-201ENST00000364726 110 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 RPL39P28-201ENST00000465655 155 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.1□□□□□ -2.23
CTR9Q6PD62 AC008737.2-201ENST00000599446 118 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CTR9Q6PD62 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 MIR8062-201ENST00000621515 85 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
CTR9Q6PD62 RNU6-268P-201ENST00000364174 107 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 RNU6-442P-201ENST00000383968 104 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 RNU6-472P-201ENST00000384299 107 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 Y_RNA.483-201ENST00000384380 101 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 Y_RNA.574-201ENST00000384766 95 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 SNORD123-201ENST00000459473 70 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 SNORA18.7-201ENST00000516910 131 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 AL117187.1-201ENST00000555482 181 ntBASIC1.09□□□□□ -2.23
CTR9Q6PD62 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.09□□□□□ -2.23
CTR9Q6PD62 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
CTR9Q6PD62 RNU6-211P-201ENST00000384047 107 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 RNU6-1289P-201ENST00000384431 106 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 Y_RNA.518-201ENST00000384552 113 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 RNU6-713P-201ENST00000384761 107 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 RPL39P39-201ENST00000455840 151 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 AC245047.8-201ENST00000456455 284 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 RPS29P1-201ENST00000465274 159 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.08□□□□□ -2.24
CTR9Q6PD62 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.08□□□□□ -2.24
CTR9Q6PD62 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 AL391903.3-201ENST00000612158 163 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.08□□□□□ -2.24
CTR9Q6PD62 MIR335-201ENST00000362173 94 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 Y_RNA.117-201ENST00000363294 101 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 MIR15B-201ENST00000385045 98 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CTR9Q6PD62 RNU6-651P-201ENST00000411040 105 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 RNU6-830P-201ENST00000516353 107 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 SNORA70.22-201ENST00000517160 124 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 AC006441.5-201ENST00000612680 209 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
CTR9Q6PD62 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CTR9Q6PD62 Y_RNA.44-201ENST00000362676 108 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 RNU4-10P-201ENST00000364383 140 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 RNU6-740P-201ENST00000364734 105 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 Y_RNA.293-201ENST00000364908 93 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 Y_RNA.461-201ENST00000384263 103 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 SNORD38C-201ENST00000384381 69 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 MIR520C-201ENST00000385005 87 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 SNORD28B-201ENST00000390993 75 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 RNA5SP496-201ENST00000391240 109 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 AL358176.2-201ENST00000425769 204 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.06□□□□□ -2.24
CTR9Q6PD62 MIR4724-201ENST00000579485 89 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 MIR4764-201ENST00000580680 88 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 AL360085.1-201ENST00000604713 532 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 uc_338.4-201ENST00000616635 176 ntBASIC1.06□□□□□ -2.24
CTR9Q6PD62 MIR367-201ENST00000362299 68 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 Y_RNA.572-201ENST00000384757 98 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 MIR526A2-201ENST00000390198 65 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.05□□□□□ -2.24
CTR9Q6PD62 SNORD2.1-201ENST00000458762 69 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 SNORD79.1-201ENST00000516069 84 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 RN7SKP164-201ENST00000516138 266 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 RNU7-43P-201ENST00000516554 64 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.05□□□□□ -2.24
CTR9Q6PD62 MIR548AR-201ENST00000582191 57 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 U2.14-201ENST00000615943 113 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 Pinc.1-201ENST00000616452 154 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CTR9Q6PD62 Y_RNA.14-201ENST00000362415 103 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms