Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC022217.4-201ENST00000604389 163 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 AC062037.1-201ENST00000605302 128 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 MIR6873-201ENST00000622788 63 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CNKSR3Q6P9H4 SNORA1B-201ENST00000362535 133 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 RNY4P6-201ENST00000363667 96 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 FTH1P12-201ENST00000432137 551 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 AC068339.1-201ENST00000526965 141 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
CNKSR3Q6P9H4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.58□□□□□ -2
CNKSR3Q6P9H4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CNKSR3Q6P9H4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
CNKSR3Q6P9H4 RNU6-414P-201ENST00000363705 104 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 RNU6-690P-201ENST00000365242 106 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 SNORA2.2-201ENST00000365473 135 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 RNU6-1104P-201ENST00000384723 104 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 MIR548O-201ENST00000408583 114 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.57□□□□□ -2
CNKSR3Q6P9H4 RNU7-25P-201ENST00000516544 62 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 AL358944.1-201ENST00000528537 144 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 AC087685.1-201ENST00000587507 141 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 AL359075.3-201ENST00000613288 217 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 AC134878.1-201ENST00000619901 243 ntBASIC2.57□□□□□ -2
CNKSR3Q6P9H4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.57□□□□□ -2
CNKSR3Q6P9H4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
CNKSR3Q6P9H4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
CNKSR3Q6P9H4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
CNKSR3Q6P9H4 AC092881.1-201ENST00000638218 2733 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
CNKSR3Q6P9H4 EDDM3CP-201ENST00000415977 425 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 SNRPGP14-201ENST00000435400 219 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 RNU6-970P-201ENST00000516312 107 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 SUMO2P16-201ENST00000519475 264 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.56□□□□□ -2
CNKSR3Q6P9H4 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 AC006441.5-201ENST00000612680 209 ntBASIC2.56□□□□□ -2
CNKSR3Q6P9H4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CNKSR3Q6P9H4 SNORD114-6-201ENST00000364393 72 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.55□□□□□ -2
CNKSR3Q6P9H4 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 AL049830.1-201ENST00000468034 425 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.55□□□□□ -2
CNKSR3Q6P9H4 SNORD36C-201ENST00000516733 66 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 AL442128.1-201ENST00000615151 90 ntBASIC2.55□□□□□ -2
CNKSR3Q6P9H4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CNKSR3Q6P9H4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 RNU6-268P-201ENST00000364174 107 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 RNA5SP173-201ENST00000364857 136 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 RNU6-938P-201ENST00000411285 103 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 MTATP8P2-201ENST00000435212 202 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AC022523.2-201ENST00000561045 150 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AC002984.1-201ENST00000591692 448 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AC021443.1-201ENST00000604478 211 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 AL353149.1-201ENST00000610667 244 ntBASIC2.54□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 SNORD115-28-201ENST00000363931 81 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 RNU7-123P-201ENST00000515911 60 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 RNU6-904P-201ENST00000516206 101 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 RNU1-142P-201ENST00000516682 145 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 MIR4762-201ENST00000585261 75 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 MIR6733-201ENST00000635723 61 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
CNKSR3Q6P9H4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CNKSR3Q6P9H4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
CNKSR3Q6P9H4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2.01
CNKSR3Q6P9H4 SNORD68-201ENST00000363214 84 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-1275P-201ENST00000391087 107 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 RNU11-5P-201ENST00000391216 129 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 RNU7-164P-201ENST00000459221 62 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 RNU6-158P-201ENST00000517104 100 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 AP002004.2-201ENST00000531656 154 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 AC141557.1-201ENST00000540982 400 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 MIR4446-201ENST00000578505 67 ntBASIC2.52□□□□□ -2.01
CNKSR3Q6P9H4 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms