Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 SNORD11-201ENST00000459124 84 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 RNU6-437P-201ENST00000459408 95 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.6□□□□□ -2.31
ATL3Q6DD88 AC040926.1-201ENST00000530195 238 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 JPX_2.1-201ENST00000614161 69 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 uc_338.22-201ENST00000622722 187 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 RNU4-80P-201ENST00000363200 141 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 Y_RNA.471-201ENST00000384312 102 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 MIR570-201ENST00000384917 97 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 SNORD72-201ENST00000390994 80 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.59□□□□□ -2.31
ATL3Q6DD88 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 RNU4-57P-201ENST00000515980 135 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 RNU6-191P-201ENST00000516295 94 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 AL080274.1-201ENST00000605565 220 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 SNORD113-5-201ENST00000607261 78 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 AC006157.1-201ENST00000611750 366 ntBASIC0.59□□□□□ -2.31
ATL3Q6DD88 Y_RNA.85-201ENST00000363014 111 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 Y_RNA.418-201ENST00000384029 102 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 Y_RNA.526-201ENST00000384572 110 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 Y_RNA.537-201ENST00000384626 109 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 RNU6-21P-201ENST00000384710 107 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.58□□□□□ -2.32
ATL3Q6DD88 MTND3P22-201ENST00000510932 243 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
ATL3Q6DD88 RPL23AP91-201ENST00000569211 455 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 AC007485.1-201ENST00000616755 206 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
ATL3Q6DD88 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNU4-73P-201ENST00000363164 141 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNU6-580P-201ENST00000365159 107 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNU6-1046P-201ENST00000516538 107 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 Y_RNA.702-201ENST00000516843 96 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNU7-181P-201ENST00000517234 74 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 MIR548AO-201ENST00000579992 96 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 MIR4795-201ENST00000584182 89 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 AC005357.1-201ENST00000588399 301 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 LARP7P1-201ENST00000605576 316 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 AC022140.2-201ENST00000623500 188 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 AC010487.4-201ENST00000637027 61 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
ATL3Q6DD88 RNU6-369P-201ENST00000362515 102 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 Y_RNA.136-201ENST00000363444 102 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 Y_RNA.370-201ENST00000365589 108 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 Y_RNA.374-201ENST00000365606 101 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 SNORD115-46-201ENST00000390982 71 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 RNU6-1248P-201ENST00000391096 64 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 Y_RNA.645-201ENST00000391229 102 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 MTCO2P33-201ENST00000402100 465 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 RNU6-764P-201ENST00000516396 105 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 MIR548S-201ENST00000581352 82 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 AC104695.3-201ENST00000604052 296 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 AL133255.1-201ENST00000606374 441 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 MIR4791-201ENST00000607666 84 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 MTND1P7-201ENST00000632801 297 ntBASIC0.56□□□□□ -2.32
ATL3Q6DD88 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.56□□□□□ -2.32
ATL3Q6DD88 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
ATL3Q6DD88 Y_RNA.168-201ENST00000363740 102 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 Y_RNA.251-201ENST00000364551 99 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 SNORD42.2-201ENST00000365570 69 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 RNU6-1067P-201ENST00000384752 107 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.55□□□□□ -2.32
ATL3Q6DD88 AC244098.3-201ENST00000424803 96 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 POLR2KP2-201ENST00000438155 177 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 MTND4P19-201ENST00000446659 478 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 HSPE1P25-201ENST00000455484 251 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 Y_RNA.637-201ENST00000459424 114 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.55□□□□□ -2.32
ATL3Q6DD88 MIR4801-201ENST00000582704 82 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
ATL3Q6DD88 RNU6-396P-201ENST00000365369 105 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 RNU6-716P-201ENST00000365621 103 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 RNU6-144P-201ENST00000383951 107 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
ATL3Q6DD88 RNU6-496P-201ENST00000516145 99 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 MIR2115-201ENST00000516657 100 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 MIR4300-201ENST00000581016 96 ntBASIC0.54□□□□□ -2.32
ATL3Q6DD88 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 SNORD113-8-201ENST00000363497 74 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 SNORD45.3-201ENST00000363836 72 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 Y_RNA.183-201ENST00000363882 113 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 RNU6-899P-201ENST00000363947 107 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ATL3Q6DD88 SNORA51.10-201ENST00000384418 136 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 RNU6-102P-201ENST00000384485 104 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 SNORA2B-201ENST00000384583 137 ntBASIC0.53□□□□□ -2.32
ATL3Q6DD88 RNU6-763P-201ENST00000390865 106 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms