Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU6-826P-201ENST00000516827 104 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP170-201ENST00000517150 101 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU7-181P-201ENST00000517234 74 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP437-201ENST00000517249 129 ntBASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DQA1Q5Y7H0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.85-201ENST00000363014 111 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-833P-201ENST00000363486 107 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORA27-201ENST00000384323 126 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORA48.1-201ENST00000390879 135 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP465-201ENST00000391195 109 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU7-164P-201ENST00000459221 62 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 RPL23AP63-201ENST00000498752 471 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-830P-201ENST00000516353 107 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC006023.1-201ENST00000603944 259 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL035470.1-201ENST00000622571 220 ntBASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1Q5Y7H0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORA63.5-201ENST00000363548 123 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU4-16P-201ENST00000364737 141 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-950P-201ENST00000384651 107 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR516B2-201ENST00000385190 85 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 AL627390.1-201ENST00000396055 340 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-554P-201ENST00000410466 106 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORA31.4-201ENST00000516049 129 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQA1Q5Y7H0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.43-201ENST00000362670 111 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-112P-201ENST00000363599 104 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC108938.1-201ENST00000451204 136 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 RNU7-123P-201ENST00000515911 60 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 AC022523.2-201ENST00000561045 150 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 MIR4305-201ENST00000583252 102 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1Q5Y7H0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HLA-DQA1Q5Y7H0 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-1255P-201ENST00000363434 112 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-414P-201ENST00000363705 104 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR1267-201ENST00000408723 78 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU7-34P-201ENST00000459394 64 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU2-35P-201ENST00000516446 142 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR4778-201ENST00000577635 80 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3162-201ENST00000581818 82 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 AL355596.1-201ENST00000565399 3996 ntBASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQA1Q5Y7H0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 AL442644.1-201ENST00000454390 3105 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNY4P6-201ENST00000363667 96 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR759-201ENST00000390224 91 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC090821.2-201ENST00000523552 176 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC021506.2-201ENST00000612354 169 ntBASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1Q5Y7H0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.362-201ENST00000365518 110 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-32P-201ENST00000383948 107 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-13P-201ENST00000384248 107 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-12P-201ENST00000384604 107 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-41P-201ENST00000384741 107 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-998P-201ENST00000515894 101 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1Q5Y7H0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 AL589743.1-201ENST00000551932 2712 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-34-201ENST00000362441 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-12-201ENST00000362583 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-29-201ENST00000362834 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-9-201ENST00000362912 82 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms