| CTXN3 | Q4LDR2 | MIR136-201 | ENST00000385207 | 82 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU1-98P-201 | ENST00000458992 | 160 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RN7SKP88-201 | ENST00000516847 | 250 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | MIR5688-201 | ENST00000580619 | 83 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | 7SK.8-201 | ENST00000612110 | 250 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | 7SK.11-201 | ENST00000615477 | 250 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | 7SK.13-201 | ENST00000622040 | 250 nt | BASIC | 1.5 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU6-997P-201 | ENST00000384725 | 107 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AC137770.1-201 | ENST00000504620 | 530 nt | TSL 3 BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.673-201 | ENST00000516306 | 88 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL161722.3-201 | ENST00000605789 | 2983 nt | BASIC | 1.49 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.76-201 | ENST00000362931 | 109 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.193-201 | ENST00000363979 | 102 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.242-201 | ENST00000364473 | 110 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | MIR3128-201 | ENST00000581957 | 66 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL353770.2-201 | ENST00000620024 | 78 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AL365265.1-201 | ENST00000621045 | 234 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | SKIL-204 | ENST00000458537 | 7182 nt | APPRIS P1 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.65-201 | ENST00000362846 | 100 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | Y_RNA.304-201 | ENST00000365011 | 112 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | SNORD26-201 | ENST00000384147 | 75 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | MIR320A-201 | ENST00000385302 | 82 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | snosnR66.1-201 | ENST00000391095 | 99 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNA5SP247-201 | ENST00000411181 | 105 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | AC245047.8-201 | ENST00000456455 | 284 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | MTND1P19-201 | ENST00000511780 | 315 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | SNORD116-28-201 | ENST00000516123 | 91 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| CTXN3 | Q4LDR2 | RNU6-268P-201 | ENST00000364174 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORA18.7-201 | ENST00000516910 | 131 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Pinc.1-201 | ENST00000616452 | 154 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR8065-201 | ENST00000620577 | 100 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | PPP1R3A-201 | ENST00000284601 | 4384 nt | APPRIS P1 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.307-201 | ENST00000365022 | 117 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.478-201 | ENST00000384358 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RPL39P39-201 | ENST00000455840 | 151 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AC004817.2-201 | ENST00000561794 | 651 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.20-201 | ENST00000362479 | 113 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.60-201 | ENST00000362831 | 98 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.262-201 | ENST00000364641 | 102 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.447-201 | ENST00000384184 | 113 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORA74.3-201 | ENST00000517108 | 154 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AC006441.5-201 | ENST00000612680 | 209 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | NPPA-AS1_2.1-201 | ENST00000618496 | 149 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | snoU2_19.4-201 | ENST00000364329 | 80 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | Y_RNA.269-201 | ENST00000364685 | 89 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AC040936.1-201 | ENST00000534543 | 172 nt | TSL 5 BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AC015726.2-201 | ENST00000620112 | 122 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MT-ATP8-201 | ENST00000361851 | 207 nt | APPRIS P1 BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU4-17P-201 | ENST00000365598 | 141 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU1-123P-201 | ENST00000458950 | 160 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RN7SKP164-201 | ENST00000516138 | 266 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR4662B-201 | ENST00000579498 | 81 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AC011921.3-201 | ENST00000605540 | 361 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR8070-201 | ENST00000616510 | 88 nt | BASIC | 1.42 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | ABCA5-201 | ENST00000392676 | 8220 nt | APPRIS P1 TSL 1 (best) BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR520C-201 | ENST00000385005 | 87 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | MIR6078-201 | ENST00000611069 | 100 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | TRAJ36-201 | ENST00000614481 | 58 nt | APPRIS P1 BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| CTXN3 | Q4LDR2 | NPAT-201 | ENST00000278612 | 6117 nt | APPRIS P2 TSL 1 (best) BASIC | 1.4 | □□□□□ -2.19 | | |
| CTXN3 | Q4LDR2 | Y_RNA.226-201 | ENST00000364337 | 114 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CTXN3 | Q4LDR2 | RNY4P28-201 | ENST00000365281 | 93 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CTXN3 | Q4LDR2 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CTXN3 | Q4LDR2 | MIR616-201 | ENST00000385293 | 97 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| CTXN3 | Q4LDR2 | AL365434.1-201 | ENST00000412362 | 380 nt | TSL 3 BASIC | 1.4 | □□□□□ -2.19 | | |