Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 Y_RNA.476-201ENST00000384347 108 ntBASIC1.68□□□□□ -2.14
TRIM60Q495X7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.68□□□□□ -2.14
TRIM60Q495X7 RNU6-322P-201ENST00000516010 103 ntBASIC1.68□□□□□ -2.14
TRIM60Q495X7 SNORD116-28-201ENST00000516123 91 ntBASIC1.68□□□□□ -2.14
TRIM60Q495X7 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
TRIM60Q495X7 AL049861.1-201ENST00000603130 150 ntBASIC1.68□□□□□ -2.14
TRIM60Q495X7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 RNU6-442P-201ENST00000383968 104 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 MIR452-201ENST00000385020 85 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 MIR626-201ENST00000385032 94 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM60Q495X7 MTND1P19-201ENST00000511780 315 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 Y_RNA.680-201ENST00000516441 93 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 RNU6-111P-201ENST00000517179 105 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 AC100767.1-201ENST00000528178 123 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
TRIM60Q495X7 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 SNORD1A-201ENST00000364968 72 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 RNU4-17P-201ENST00000365598 141 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 SNX2P2-201ENST00000424553 323 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM60Q495X7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.66□□□□□ -2.14
TRIM60Q495X7 uc_338.4-201ENST00000616635 176 ntBASIC1.66□□□□□ -2.14
TRIM60Q495X7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRIM60Q495X7 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
TRIM60Q495X7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.65□□□□□ -2.15
TRIM60Q495X7 Y_RNA.539-201ENST00000384635 107 ntBASIC1.65□□□□□ -2.15
TRIM60Q495X7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM60Q495X7 SNORD11-201ENST00000459124 84 ntBASIC1.65□□□□□ -2.15
TRIM60Q495X7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.65□□□□□ -2.15
TRIM60Q495X7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.65□□□□□ -2.15
TRIM60Q495X7 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 MIR96-201ENST00000362288 78 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 SNORD38C-201ENST00000384381 69 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 MIR613-201ENST00000385248 95 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 AL451046.2-201ENST00000403074 277 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM60Q495X7 AL365434.2-201ENST00000607979 234 ntBASIC1.64□□□□□ -2.15
TRIM60Q495X7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM60Q495X7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM60Q495X7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 MIR1298-201ENST00000408783 112 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM60Q495X7 AC245047.8-201ENST00000456455 284 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 AC008507.4-201ENST00000585464 127 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 FAM106DP-201ENST00000586416 501 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 MIR6078-201ENST00000611069 100 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 Pinc.1-201ENST00000616452 154 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.63□□□□□ -2.15
TRIM60Q495X7 AC068700.1-201ENST00000565862 3754 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM60Q495X7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM60Q495X7 RNY4P28-201ENST00000365281 93 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 MIR516B2-201ENST00000385190 85 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 MIR136-201ENST00000385207 82 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 MT-TG-201ENST00000387429 68 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 COX6CP14-201ENST00000469580 174 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 AC092991.1-201ENST00000477176 376 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 RN7SKP164-201ENST00000516138 266 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 RNU7-149P-201ENST00000516739 59 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 RNU6-922P-201ENST00000516753 99 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 MIR4662B-201ENST00000579498 81 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
TRIM60Q495X7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM60Q495X7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.61□□□□□ -2.15
TRIM60Q495X7 MIR15B-201ENST00000385045 98 ntBASIC1.61□□□□□ -2.15
TRIM60Q495X7 RNU6-493P-201ENST00000391321 108 ntBASIC1.61□□□□□ -2.15
TRIM60Q495X7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM60Q495X7 AC015922.2-201ENST00000435593 184 ntBASIC1.61□□□□□ -2.15
TRIM60Q495X7 RNU6-126P-201ENST00000516685 103 ntBASIC1.61□□□□□ -2.15
TRIM60Q495X7 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 RNU6-653P-201ENST00000363074 106 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 RNU6-379P-201ENST00000363813 104 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 RNU6-923P-201ENST00000364753 107 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 MIR616-201ENST00000385293 97 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 SNORD72-201ENST00000390994 80 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 SNORD58.1-201ENST00000391313 66 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 RNY3P16-201ENST00000516338 101 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AC090049.2-201ENST00000550377 109 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AP001485.1-201ENST00000604799 199 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AL021707.8-201ENST00000609428 183 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AC022709.1-201ENST00000615967 87 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 AL121890.5-201ENST00000620848 304 ntBASIC1.6□□□□□ -2.15
TRIM60Q495X7 Y_RNA.83-201ENST00000363005 113 ntBASIC1.59□□□□□ -2.15
TRIM60Q495X7 RNY3P5-201ENST00000384127 102 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms