Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 MIR802-201ENST00000390235 94 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 Y_RNA.590-201ENST00000410140 107 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 RNA5SP247-201ENST00000411181 105 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 AC245047.8-201ENST00000456455 284 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 RNU6-1132P-201ENST00000459214 107 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 RNU6-830P-201ENST00000516353 107 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 SNORA74.3-201ENST00000517108 154 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 AC100767.1-201ENST00000528178 123 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.4□□□□□ -2.19
NFIL3Q16649 MIR4643-201ENST00000577473 78 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 AC006006.1-201ENST00000603082 144 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 AC006441.5-201ENST00000612680 209 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NFIL3Q16649 SNORD38C-201ENST00000384381 69 ntBASIC1.39□□□□□ -2.19
NFIL3Q16649 RNU6-1054P-201ENST00000411293 104 ntBASIC1.39□□□□□ -2.19
NFIL3Q16649 AL049861.1-201ENST00000603130 150 ntBASIC1.39□□□□□ -2.19
NFIL3Q16649 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
NFIL3Q16649 Y_RNA.24-201ENST00000362508 103 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 RNU6-1138P-201ENST00000365359 106 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 MIR548H3-201ENST00000408771 118 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
NFIL3Q16649 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 Y_RNA.679-201ENST00000516416 91 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 RNU7-149P-201ENST00000516739 59 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 U4.1-201ENST00000620349 87 ntBASIC1.38□□□□□ -2.19
NFIL3Q16649 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.38□□□□□ -2.19
NFIL3Q16649 Y_RNA.277-201ENST00000364754 102 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 Y_RNA.304-201ENST00000365011 112 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 Y_RNA.572-201ENST00000384757 98 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 SNORD77.4-201ENST00000516158 81 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 RNU6-947P-201ENST00000516264 106 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
NFIL3Q16649 MIR4503-201ENST00000582187 83 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 AL096861.1-201ENST00000610899 123 ntBASIC1.37□□□□□ -2.19
NFIL3Q16649 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 Y_RNA.229-201ENST00000364347 113 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
NFIL3Q16649 SNORD111.1-201ENST00000516421 86 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 SNORA18.7-201ENST00000516910 131 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 BX284668.6-201ENST00000606899 438 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 Pinc.1-201ENST00000616452 154 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 AL365265.1-201ENST00000621045 234 ntBASIC1.36□□□□□ -2.19
NFIL3Q16649 MIR337-201ENST00000362281 93 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 Y_RNA.54-201ENST00000362766 105 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 Y_RNA.76-201ENST00000362931 109 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 Y_RNA.416-201ENST00000384014 113 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 RNU6-196P-201ENST00000384315 107 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.35□□□□□ -2.19
NFIL3Q16649 AC245047.7-201ENST00000440265 293 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 RN7SKP164-201ENST00000516138 266 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 RNU7-43P-201ENST00000516554 64 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 MIR3192-201ENST00000584920 77 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 AC011921.3-201ENST00000605540 361 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 AC062037.2-201ENST00000610137 73 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.35□□□□□ -2.19
NFIL3Q16649 MIR520C-201ENST00000385005 87 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 Y_RNA.587-201ENST00000391210 103 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 COX6CP14-201ENST00000469580 174 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 MTND1P19-201ENST00000511780 315 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 MIR4764-201ENST00000580680 88 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 AL162730.1-201ENST00000605734 292 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 AL442067.1-201ENST00000613261 223 ntBASIC1.34□□□□□ -2.19
NFIL3Q16649 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
NFIL3Q16649 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NFIL3Q16649 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 RNU6-653P-201ENST00000363074 106 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 Y_RNA.350-201ENST00000365409 98 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 Y_RNA.452-201ENST00000384202 108 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 SNORD58.1-201ENST00000391313 66 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 snoU13.25-201ENST00000458945 104 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
NFIL3Q16649 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
NFIL3Q16649 Y_RNA.20-201ENST00000362479 113 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 snoU2_19.4-201ENST00000364329 80 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 Y_RNA.292-201ENST00000364904 97 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 RNU6-463P-201ENST00000384340 107 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 Y_RNA.486-201ENST00000384398 107 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.32□□□□□ -2.2
NFIL3Q16649 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.32□□□□□ -2.2
NFIL3Q16649 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 SNORD116-28-201ENST00000516123 91 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 RNU6-126P-201ENST00000516685 103 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 AL391903.3-201ENST00000612158 163 ntBASIC1.32□□□□□ -2.2
NFIL3Q16649 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.32□□□□□ -2.2
NFIL3Q16649 RNU6-702P-201ENST00000364982 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms