Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 SNORA1.2-201ENST00000365189 134 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 Y_RNA.494-201ENST00000384432 111 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNU6-816P-201ENST00000390914 107 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNU6-1268P-201ENST00000391214 107 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNU6-1239P-201ENST00000391310 107 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNU2-7P-201ENST00000410794 178 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 RNU2-11P-201ENST00000459191 187 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 MIR2052-201ENST00000636055 55 ntBASIC3.17□□□□□ -1.9
NR1H3Q13133 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
NR1H3Q13133 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H3Q13133 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H3Q13133 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H3Q13133 SNORA63D-201ENST00000364359 132 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 SNORA4.2-201ENST00000365313 147 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 Y_RNA.558-201ENST00000384685 113 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 RNU6-1031P-201ENST00000384773 107 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 MIR452-201ENST00000385020 85 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 EEF1A1P41-201ENST00000414667 207 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 UBL5P3-201ENST00000475112 231 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 RNU6-904P-201ENST00000516206 101 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H3Q13133 AC024614.2-201ENST00000577584 372 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.16□□□□□ -1.9
NR1H3Q13133 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
NR1H3Q13133 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
NR1H3Q13133 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
NR1H3Q13133 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NR1H3Q13133 RNU6-49P-201ENST00000384256 107 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 RNA5SP465-201ENST00000391195 109 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 UBE2DNL-203ENST00000474922 222 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 AC004812.1-201ENST00000540773 146 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NR1H3Q13133 AC007336.1-201ENST00000576365 3828 ntBASIC3.15□□□□□ -1.91
NR1H3Q13133 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 SNORA70.7-201ENST00000384159 133 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 Y_RNA.507-201ENST00000384500 99 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 MIR520A-201ENST00000384862 85 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 MIR516B2-201ENST00000385190 85 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 AL512326.2-201ENST00000426359 151 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 RPS23P4-201ENST00000487908 423 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 RNU6-158P-201ENST00000517104 100 ntBASIC3.14□□□□□ -1.91
NR1H3Q13133 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H3Q13133 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NR1H3Q13133 Y_RNA.220-201ENST00000364244 109 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 RNU4-36P-201ENST00000364294 144 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 Y_RNA.531-201ENST00000384589 121 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 MIR136-201ENST00000385207 82 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 MIR1283-2-201ENST00000408621 87 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 DEFB131E-201ENST00000532329 154 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 ELOCP29-201ENST00000588193 334 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.13□□□□□ -1.91
NR1H3Q13133 AL442644.1-201ENST00000454390 3105 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H3Q13133 AC092881.1-201ENST00000638218 2733 ntBASIC3.13□□□□□ -1.91
NR1H3Q13133 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
NR1H3Q13133 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NR1H3Q13133 Y_RNA.370-201ENST00000365589 108 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 RNU1-109P-201ENST00000383960 147 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 MIR518A2-201ENST00000384966 87 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 MTATP8P2-201ENST00000435212 202 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 AL135938.1-201ENST00000443141 297 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 RNU6-893P-201ENST00000458841 100 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 RNU7-34P-201ENST00000459394 64 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.12□□□□□ -1.91
NR1H3Q13133 SNORA31.4-201ENST00000516049 129 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 RNVU1-2-201ENST00000516326 135 ntBASIC3.12□□□□□ -1.91
NR1H3Q13133 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NR1H3Q13133 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NR1H3Q13133 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NR1H3Q13133 RNU6-661P-201ENST00000362409 107 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 Y_RNA.299-201ENST00000364973 94 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 MIR488-201ENST00000365739 83 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 RNA5SP367-201ENST00000516557 118 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 MIR3152-201ENST00000579801 74 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 AL513534.2-201ENST00000603836 250 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 AC087741.2-201ENST00000619415 172 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 AL035425.3-201ENST00000564206 4996 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 AP000648.3-201ENST00000623539 4507 ntBASIC3.11□□□□□ -1.91
NR1H3Q13133 Y_RNA.93-201ENST00000363066 109 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 Y_RNA.107-201ENST00000363190 121 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 POLR2J4-204ENST00000418424 324 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 AC093850.1-201ENST00000454121 251 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 RNU7-67P-201ENST00000459003 62 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 RNU7-113P-201ENST00000459273 62 ntBASIC3.1□□□□□ -1.91
NR1H3Q13133 RNU7-45P-201ENST00000459460 63 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms