Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PCDH1Q08174 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PCDH1Q08174 AL442644.1-201ENST00000454390 3105 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-34-201ENST00000362441 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-12-201ENST00000362583 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-29-201ENST00000362834 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-9-201ENST00000362912 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-21-201ENST00000362963 81 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-14-201ENST00000363090 81 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-13-201ENST00000363358 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-41-201ENST00000363608 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-11-201ENST00000363616 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-5-201ENST00000363633 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-39-201ENST00000363694 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-4-201ENST00000363810 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-16-201ENST00000363887 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-6-201ENST00000363942 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORA38-201ENST00000363946 132 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-42-201ENST00000364273 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORA63D-201ENST00000364359 132 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-15-201ENST00000364809 81 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-1-201ENST00000364961 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-26-201ENST00000365067 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-10-201ENST00000365073 81 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-43-201ENST00000365503 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-36-201ENST00000365629 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 RNU7-96P-201ENST00000459535 64 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 RNU6-998P-201ENST00000515894 101 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 RNA5SP168-201ENST00000516642 112 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORD115-40-201ENST00000606510 82 ntBASIC2.71□□□□□ -1.98
PCDH1Q08174 SNORA51.10-201ENST00000384418 136 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 Y_RNA.544-201ENST00000384650 113 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 MIR1283-2-201ENST00000408621 87 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 EEF1A1P41-201ENST00000414667 207 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDH1Q08174 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 MIR3124-201ENST00000582636 67 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
PCDH1Q08174 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PCDH1Q08174 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PCDH1Q08174 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH1Q08174 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH1Q08174 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDH1Q08174 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PCDH1Q08174 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PCDH1Q08174 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDH1Q08174 SNORA4.2-201ENST00000365313 147 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 RNA5SP465-201ENST00000391195 109 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 RNU7-12P-201ENST00000516030 62 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 SNORA40.13-201ENST00000516379 120 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 RNU7-181P-201ENST00000517234 74 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 EIF4BP1-201ENST00000554881 351 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 AP006437.1-201ENST00000641440 3685 ntBASIC2.69□□□□□ -1.98
PCDH1Q08174 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDH1Q08174 MIR302B-201ENST00000362188 73 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 Y_RNA.494-201ENST00000384432 111 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 RNU6-1031P-201ENST00000384773 107 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 MIR1267-201ENST00000408723 78 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 HMGN2P3-201ENST00000433603 273 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDH1Q08174 HMGN2P5-201ENST00000436882 273 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
PCDH1Q08174 MIR518A2-201ENST00000384966 87 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 RNA5SP144-201ENST00000410846 116 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDH1Q08174 SNORA31.4-201ENST00000516049 129 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 RNVU1-2-201ENST00000516326 135 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDH1Q08174 AC021613.1-201ENST00000623880 111 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 AL137790.1-201ENST00000634283 177 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 AL162726.3-218ENST00000636401 95 ntBASIC2.67□□□□□ -1.98
PCDH1Q08174 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDH1Q08174 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH1Q08174 Y_RNA.78-201ENST00000362970 110 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 MIR590-201ENST00000385008 97 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 MIR452-201ENST00000385020 85 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 AC107297.1-201ENST00000459991 176 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 RNU7-6P-201ENST00000516845 62 ntBASIC2.66□□□□□ -1.98
PCDH1Q08174 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PCDH1Q08174 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCDH1Q08174 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDH1Q08174 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDH1Q08174 SNORA5B-201ENST00000363786 132 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 MIR520A-201ENST00000384862 85 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 MIR9-1-201ENST00000385198 89 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 SNORA48.1-201ENST00000390879 135 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 SNORA19.1-201ENST00000410656 129 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 AL022718.1-201ENST00000412004 84 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 RNU2-11P-201ENST00000459191 187 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 RNU6-970P-201ENST00000516312 107 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms