Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SNORD33-201ENST00000362761 85 ntBASIC1□□□□□ -2.25
CKAP4Q07065 snoU2-30.1-201ENST00000365012 70 ntBASIC1□□□□□ -2.25
CKAP4Q07065 Y_RNA.336-201ENST00000365307 109 ntBASIC1□□□□□ -2.25
CKAP4Q07065 MIR653-201ENST00000385279 96 ntBASIC1□□□□□ -2.25
CKAP4Q07065 MIR891A-201ENST00000401237 79 ntBASIC1□□□□□ -2.25
CKAP4Q07065 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1□□□□□ -2.25
CKAP4Q07065 SNRPGP14-201ENST00000435400 219 ntBASIC1□□□□□ -2.25
CKAP4Q07065 AC245047.8-201ENST00000456455 284 ntBASIC1□□□□□ -2.25
CKAP4Q07065 AC114811.1-201ENST00000507207 168 ntBASIC1□□□□□ -2.25
CKAP4Q07065 SCARNA8-201ENST00000515924 131 ntBASIC1□□□□□ -2.25
CKAP4Q07065 RNU7-12P-201ENST00000516030 62 ntBASIC1□□□□□ -2.25
CKAP4Q07065 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
CKAP4Q07065 AL391903.3-201ENST00000612158 163 ntBASIC1□□□□□ -2.25
CKAP4Q07065 uc_338.4-201ENST00000616635 176 ntBASIC1□□□□□ -2.25
CKAP4Q07065 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CKAP4Q07065 RNU1-17P-201ENST00000363022 152 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 RNU6-1138P-201ENST00000365359 106 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 RNU4-17P-201ENST00000365598 141 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 RNY3P5-201ENST00000384127 102 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 RNU6-163P-201ENST00000384396 106 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 MIR616-201ENST00000385293 97 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 MIR1298-201ENST00000408783 112 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 MLLT10P1-201ENST00000418346 262 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 PIGPP3-201ENST00000425307 415 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 HMGN2P32-201ENST00000444648 269 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 SNORD77.4-201ENST00000516158 81 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 RNU6-1007P-201ENST00000516586 107 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CKAP4Q07065 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.99□□□□□ -2.25
CKAP4Q07065 MIR4778-201ENST00000577635 80 ntBASIC0.99□□□□□ -2.25
CKAP4Q07065 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CKAP4Q07065 RNU6-1084P-201ENST00000362498 107 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 RNU6-199P-201ENST00000362954 107 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 Y_RNA.199-201ENST00000364014 102 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 Y_RNA.200-201ENST00000364018 102 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 Y_RNA.242-201ENST00000364473 110 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 Y_RNA.552-201ENST00000384665 112 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 SNORD72-201ENST00000390994 80 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.98□□□□□ -2.25
CKAP4Q07065 AC093850.1-201ENST00000454121 251 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 RN7SKP164-201ENST00000516138 266 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 RNY3P16-201ENST00000516338 101 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 RNU6-388P-201ENST00000517012 105 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 RNU6-389P-201ENST00000517048 105 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AC130289.1-201ENST00000577321 73 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 MIR4308-201ENST00000580634 81 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AL049861.1-201ENST00000603130 150 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AC006441.5-201ENST00000612680 209 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AL157834.3-201ENST00000615543 103 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 AC078938.1-201ENST00000620993 318 ntBASIC0.98□□□□□ -2.25
CKAP4Q07065 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CKAP4Q07065 MIR411-201ENST00000362239 96 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 Y_RNA.308-201ENST00000365043 101 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 SNORA2.2-201ENST00000365473 135 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNA5SP259-201ENST00000365541 109 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 Y_RNA.435-201ENST00000384095 112 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU6-1228P-201ENST00000391014 107 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 SNORA17.3-201ENST00000391159 129 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU2-55P-201ENST00000411146 174 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.97□□□□□ -2.25
CKAP4Q07065 AC023449.1-201ENST00000454464 154 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 AC092991.1-201ENST00000477176 376 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU6-917P-201ENST00000516294 104 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU7-149P-201ENST00000516739 59 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 RNU6-453P-201ENST00000516819 85 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CKAP4Q07065 MIR4662B-201ENST00000579498 81 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 MIR3937-201ENST00000580135 106 ntBASIC0.97□□□□□ -2.25
CKAP4Q07065 Y_RNA.83-201ENST00000363005 113 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Y_RNA.121-201ENST00000363309 113 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-103P-201ENST00000363686 107 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 SNORD14E-201ENST00000364009 85 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-268P-201ENST00000364174 107 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Y_RNA.257-201ENST00000364596 102 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Y_RNA.274-201ENST00000364714 101 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-442P-201ENST00000383968 104 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-484P-201ENST00000384016 107 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Y_RNA.515-201ENST00000384535 112 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 MT-TT-201ENST00000387460 66 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Y_RNA.587-201ENST00000391210 103 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-918P-201ENST00000391219 106 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU4-62P-201ENST00000410125 130 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-847P-201ENST00000411115 108 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU7-95P-201ENST00000459222 64 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 RNU6-830P-201ENST00000516353 107 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 AC090142.3-201ENST00000519012 385 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 AC090049.2-201ENST00000550377 109 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CKAP4Q07065 AC097639.2-201ENST00000603159 172 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 Z83818.1-201ENST00000603584 150 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
CKAP4Q07065 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms