Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RAC1P9-201ENST00000604990 392 ntBASIC0.56□□□□□ -2.32
HMGCS1Q01581 MIR376A1-201ENST00000616574 68 ntBASIC0.56□□□□□ -2.32
HMGCS1Q01581 AC015726.2-201ENST00000620112 122 ntBASIC0.56□□□□□ -2.32
HMGCS1Q01581 AC090971.5-201ENST00000621102 293 ntBASIC0.56□□□□□ -2.32
HMGCS1Q01581 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
HMGCS1Q01581 Y_RNA.105-201ENST00000363182 111 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 Y_RNA.122-201ENST00000363331 96 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 SNORD115-46-201ENST00000390982 71 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 RNU6-823P-201ENST00000391042 103 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGCS1Q01581 MTATP6P23-201ENST00000440153 476 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 Y_RNA.639-201ENST00000458981 102 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 MRPS35P2-201ENST00000508242 191 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 RNU6-496P-201ENST00000516145 99 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 RNU11-2P-201ENST00000516898 142 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.55□□□□□ -2.32
HMGCS1Q01581 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGCS1Q01581 MIR548AO-201ENST00000579992 96 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGCS1Q01581 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 AC006441.5-201ENST00000612680 209 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 RMST_2.1-201ENST00000617263 136 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
HMGCS1Q01581 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
HMGCS1Q01581 Y_RNA.183-201ENST00000363882 113 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 Y_RNA.445-201ENST00000384168 102 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 RNU6-474P-201ENST00000384243 107 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 RNU6-1248P-201ENST00000391096 64 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 SNORD111-201ENST00000408139 94 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 SNORD99-201ENST00000408612 74 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 RNU6-383P-201ENST00000410864 94 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.54□□□□□ -2.32
HMGCS1Q01581 MTCO1P5-201ENST00000433573 344 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 Y_RNA.637-201ENST00000459424 114 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 AL117351.2-201ENST00000513571 157 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 RNU4-57P-201ENST00000515980 135 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.54□□□□□ -2.32
HMGCS1Q01581 MIR4791-201ENST00000607666 84 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 AC090574.1-201ENST00000623186 233 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 MTND4P29-201ENST00000503122 1372 ntBASIC0.54□□□□□ -2.32
HMGCS1Q01581 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.136-201ENST00000363444 102 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 RNU6-899P-201ENST00000363947 107 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.269-201ENST00000364685 89 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.370-201ENST00000365589 108 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.394-201ENST00000383942 103 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.509-201ENST00000384506 99 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 SNORA2B-201ENST00000384583 137 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 Y_RNA.569-201ENST00000384749 103 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 RNU6-121P-201ENST00000410525 99 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 AC098869.1-201ENST00000481627 292 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 AC022709.1-201ENST00000615967 87 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 MTND1P7-201ENST00000632801 297 ntBASIC0.53□□□□□ -2.32
HMGCS1Q01581 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.53□□□□□ -2.32
HMGCS1Q01581 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HMGCS1Q01581 Y_RNA.389-201ENST00000383924 113 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 SNORA51.10-201ENST00000384418 136 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 Y_RNA.537-201ENST00000384626 109 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 RNU6-994P-201ENST00000410507 111 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 AC005534.2-201ENST00000431047 433 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 RNU7-25P-201ENST00000516544 62 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGCS1Q01581 C8orf59P2-201ENST00000603441 271 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 AC022140.2-201ENST00000623500 188 ntBASIC0.52□□□□□ -2.33
HMGCS1Q01581 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HMGCS1Q01581 Y_RNA.28-201ENST00000362554 111 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 RNU4-90P-201ENST00000362773 141 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 RNU6-1205P-201ENST00000363625 106 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 RNU1-133P-201ENST00000364867 167 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 Y_RNA.354-201ENST00000365448 111 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 SNORA63.7-201ENST00000365579 123 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 Y_RNA.431-201ENST00000384086 102 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 Y_RNA.494-201ENST00000384432 111 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 MIR215-201ENST00000384858 110 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 MIR1252-201ENST00000408861 65 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 RNU6-613P-201ENST00000410412 108 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 RNU2-13P-201ENST00000515909 113 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 AL049861.1-201ENST00000603130 150 ntBASIC0.51□□□□□ -2.33
HMGCS1Q01581 SNORD45.3-201ENST00000363836 72 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNU6-396P-201ENST00000365369 105 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 Y_RNA.355-201ENST00000365462 98 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNU6-144P-201ENST00000383951 107 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 Y_RNA.547-201ENST00000384654 119 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 Y_RNA.581-201ENST00000391017 97 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNU6-101P-201ENST00000410323 104 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AC022028.1-201ENST00000412054 408 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 ELOCP20-201ENST00000422460 345 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AC067940.1-201ENST00000458411 300 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms