Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNORD115-40-201ENST00000606510 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 U6.114-201ENST00000636407 96 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-560P-201ENST00000364007 108 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-336P-201ENST00000364891 107 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-354P-201ENST00000383862 107 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-610P-201ENST00000384264 107 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU2-9P-201ENST00000410194 145 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.54□□□□□ -2.5
HSPG2P98160 AL121655.1-201ENST00000605811 308 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AL136370.1-201ENST00000608166 691 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC064836.2-201ENST00000609491 462 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 MIR382-201ENST00000637119 76 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNY1P12-201ENST00000364251 105 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-407P-201ENST00000365280 104 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 MIR518F-201ENST00000384973 87 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-980P-201ENST00000516925 103 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 AC016911.1-201ENST00000613297 452 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-933P-201ENST00000384424 107 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-393P-201ENST00000384475 107 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-291P-201ENST00000384720 107 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 AC096949.1-201ENST00000412047 152 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-86P-201ENST00000606534 107 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 SNORD115-30-201ENST00000364117 82 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 MIR617-201ENST00000385030 97 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU6-903P-201ENST00000391270 109 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 AC022028.1-201ENST00000412054 408 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 MTND3P8-201ENST00000412909 339 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 MTCO2P27-201ENST00000420740 428 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 AC108729.2-201ENST00000476543 840 ntBASIC-0.55□□□□□ -2.5
HSPG2P98160 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.55□□□□□ -2.5
HSPG2P98160 RNU4-28P-201ENST00000364739 141 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU6-456P-201ENST00000384493 107 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 MIR548K-201ENST00000408406 116 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNA5SP475-201ENST00000410568 110 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AC244090.1-201ENST00000441884 93 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AP000533.3-201ENST00000447704 118 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AC091144.1-201ENST00000519573 138 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AC109347.2-201ENST00000610220 349 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 MIR8055-201ENST00000610739 97 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU6-433P-201ENST00000363216 104 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU6-723P-201ENST00000383973 107 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD116-9-201ENST00000384000 95 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD116-3-201ENST00000384287 95 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD116-8-201ENST00000384365 95 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD116-7-201ENST00000384404 95 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD116-5-201ENST00000384462 95 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 MIR521-1-201ENST00000384902 87 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORA40.2-201ENST00000390847 128 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.56□□□□□ -2.5
HSPG2P98160 RNA5SP484-201ENST00000458857 111 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU2-69P-201ENST00000516061 100 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORA25.16-201ENST00000516741 121 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AL353803.5-201ENST00000599815 141 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 AL133255.1-201ENST00000606374 441 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 SNORD114-7-201ENST00000362520 77 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU6-136P-201ENST00000384663 107 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 MIR548I2-201ENST00000408348 149 ntBASIC-0.56□□□□□ -2.5
HSPG2P98160 RNU6-266P-201ENST00000364225 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-431P-201ENST00000383874 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 MRPL42P2-201ENST00000403169 426 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNA5SP237-201ENST00000410414 113 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU7-104P-201ENST00000459398 79 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 MIR548H5-201ENST00000580314 60 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 MIR2681-201ENST00000581814 105 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 U6.115-201ENST00000636045 103 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNA5SP133-201ENST00000363368 119 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-226P-201ENST00000363778 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-865P-201ENST00000364772 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU7-13P-201ENST00000516413 62 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU7-10P-201ENST00000607194 63 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 RNU6-154P-201ENST00000384306 106 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.57□□□□□ -2.5
HSPG2P98160 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.57□□□□□ -2.5
HSPG2P98160 SNORA25.10-201ENST00000515926 124 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms