Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 SNORA13-201ENST00000458790 133 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.29□□□□□ -2.62
RPS28P62857 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 RNA5SP33-201ENST00000516687 98 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 RNU7-188P-201ENST00000517063 64 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 MIR3179-1-201ENST00000578940 84 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 MIR3179-2-201ENST00000579107 84 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 MIR3179-3-201ENST00000579566 84 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 MIR3179-4-201ENST00000617599 84 ntBASIC-1.29□□□□□ -2.62
RPS28P62857 RNU6-502P-201ENST00000362419 108 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 SNORD115-2-201ENST00000362842 82 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 RNU6-926P-201ENST00000384075 107 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 MIR517B-201ENST00000385102 67 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 SNORD110-201ENST00000408189 75 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 AC244505.6-201ENST00000452829 130 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 RNU7-53P-201ENST00000516705 60 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 AC008507.4-201ENST00000585464 127 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 MIR8055-201ENST00000610739 97 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 AL354950.2-201ENST00000617939 290 ntBASIC-1.3□□□□□ -2.62
RPS28P62857 SNORD115-34-201ENST00000362441 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-12-201ENST00000362583 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-29-201ENST00000362834 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-9-201ENST00000362912 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-21-201ENST00000362963 81 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-14-201ENST00000363090 81 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-13-201ENST00000363358 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-41-201ENST00000363608 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-11-201ENST00000363616 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-5-201ENST00000363633 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-39-201ENST00000363694 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-4-201ENST00000363810 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-16-201ENST00000363887 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-6-201ENST00000363942 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-42-201ENST00000364273 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-15-201ENST00000364809 81 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-1-201ENST00000364961 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-26-201ENST00000365067 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-10-201ENST00000365073 81 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-43-201ENST00000365503 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-36-201ENST00000365629 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 RNU6-431P-201ENST00000383874 107 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD64-201ENST00000386683 67 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 AL031003.1-201ENST00000404229 172 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 AC011352.1-201ENST00000512300 793 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 AL118558.2-201ENST00000556294 238 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 MIR3165-201ENST00000579874 75 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 SNORD115-40-201ENST00000606510 82 ntBASIC-1.31□□□□□ -2.62
RPS28P62857 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 RNU6-192P-201ENST00000391253 100 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 RNA5SP237-201ENST00000410414 113 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 RNA5SP261-201ENST00000410536 106 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.32□□□□□ -2.62
RPS28P62857 AC006210.1-201ENST00000424882 111 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 snoU13.11-201ENST00000459219 104 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 SCARNA1-201ENST00000517138 166 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 AL391834.2-201ENST00000609982 546 ntBASIC-1.32□□□□□ -2.62
RPS28P62857 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 SNORD113-6-201ENST00000363345 75 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 RNA5SP245-201ENST00000364239 121 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 RNU6-879P-201ENST00000364328 108 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 RNU4-66P-201ENST00000365199 138 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 MIR517A-201ENST00000385001 87 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 MTATP6P17-201ENST00000431030 672 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 MTATP6P13-201ENST00000438531 667 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.33□□□□□ -2.62
RPS28P62857 RNU6-175P-201ENST00000516896 107 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.33□□□□□ -2.62
RPS28P62857 MIR3124-201ENST00000582636 67 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 MIR382-201ENST00000637119 76 ntBASIC-1.33□□□□□ -2.62
RPS28P62857 AL596211.1-201ENST00000569873 2277 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 RNU6-128P-201ENST00000383976 107 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 EIF1P2-201ENST00000428233 350 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.34□□□□□ -2.62
RPS28P62857 CHEK2P4-201ENST00000450340 246 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 RNU6-437P-201ENST00000459408 95 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 SNORA40.9-201ENST00000515895 93 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 AC131281.1-201ENST00000522984 164 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 MIR5696-201ENST00000578474 85 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.34□□□□□ -2.62
RPS28P62857 AP000942.4-201ENST00000604811 241 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 AC092954.2-201ENST00000609103 430 ntBASIC-1.34□□□□□ -2.62
RPS28P62857 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.35□□□□□ -2.63
RPS28P62857 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.35□□□□□ -2.63
RPS28P62857 RNU6-901P-201ENST00000384593 106 ntBASIC-1.35□□□□□ -2.63
RPS28P62857 SNORD72-201ENST00000390994 80 ntBASIC-1.35□□□□□ -2.63
RPS28P62857 RNA5SP401-201ENST00000515920 127 ntBASIC-1.35□□□□□ -2.63
RPS28P62857 SNORD22.1-201ENST00000516331 125 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms