Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNU6-674P-201ENST00000363831 107 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 SNORD14C-201ENST00000365382 88 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 SNORA40.5-201ENST00000391061 128 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 AC096531.1-201ENST00000419107 107 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 MTND4P28-201ENST00000426217 387 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 RPL39P25-201ENST00000449384 154 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 RNU6-437P-201ENST00000459408 95 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 MIR3925-201ENST00000584674 77 ntBASIC-0.64□□□□□ -2.51
HIST1H2BDP58876 RNU6-716P-201ENST00000365621 103 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 RNY1P14-201ENST00000384426 108 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 RNU6-535P-201ENST00000384722 107 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 DEFB108C-201ENST00000400154 252 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AC087499.4-201ENST00000448505 178 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AC091951.2-201ENST00000500762 203 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AL080274.1-201ENST00000605565 220 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AC022441.3-201ENST00000605737 136 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AL133255.1-201ENST00000606374 441 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AC006157.1-201ENST00000611750 366 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 SNORA70.25-201ENST00000612741 95 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AP001282.2-201ENST00000616149 309 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 MIR6514-201ENST00000622549 70 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 AC090617.10-201ENST00000624308 134 ntBASIC-0.65□□□□□ -2.51
HIST1H2BDP58876 SNORA27-201ENST00000384323 126 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 RNU6-831P-201ENST00000384548 107 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 U8.15-201ENST00000390947 134 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 RNU6-938P-201ENST00000411285 103 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 AC098826.2-201ENST00000452011 651 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 MIR2053-201ENST00000459295 91 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 RPS29P24-201ENST00000486345 171 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 AC007751.1-201ENST00000529260 376 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 AC006362.1-201ENST00000567392 174 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 MTND5P34-201ENST00000568888 325 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 MIR5706-201ENST00000579841 80 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 AC010205.1-201ENST00000616668 449 ntBASIC-0.66□□□□□ -2.52
HIST1H2BDP58876 SNORD115-28-201ENST00000363931 81 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD49B-201ENST00000365172 72 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD116-9-201ENST00000384000 95 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 RNU6-708P-201ENST00000384217 107 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD116-3-201ENST00000384287 95 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD116-8-201ENST00000384365 95 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD116-7-201ENST00000384404 95 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 SNORD116-5-201ENST00000384462 95 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 MTND4LP16-201ENST00000440828 295 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 CR383656.4-201ENST00000546909 122 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 MIR4491-201ENST00000581087 68 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 MIR4677-201ENST00000584153 80 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 U7.6-201ENST00000610841 64 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 AC092794.2-201ENST00000620933 563 ntBASIC-0.67□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 RNU6-259P-201ENST00000383999 107 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 SNORA36B-201ENST00000410438 131 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 RPL21P38-201ENST00000418090 167 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 AC010424.1-201ENST00000506336 297 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 RNU6-475P-201ENST00000516073 104 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 RNU6-897P-201ENST00000517135 105 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 AC138749.4-201ENST00000563970 127 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 MIR4790-201ENST00000577799 79 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 AL662814.1-201ENST00000617364 121 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 AC024614.3-201ENST00000637860 256 ntBASIC-0.68□□□□□ -2.52
HIST1H2BDP58876 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 RNU4-30P-201ENST00000410245 143 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 MTND1P2-201ENST00000430604 821 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 MTND5P5-201ENST00000503764 376 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 AC124312.5-201ENST00000604451 268 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 AC022140.2-201ENST00000623500 188 ntBASIC-0.69□□□□□ -2.52
HIST1H2BDP58876 RNU6-726P-201ENST00000364680 107 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 SNORA72.6-201ENST00000384520 129 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 SNORA75.1-201ENST00000391130 148 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 MIR548I3-201ENST00000408378 149 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.7□□□□□ -2.52
HIST1H2BDP58876 RNA5SP237-201ENST00000410414 113 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 229.5 ms