Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 U6.104-201ENST00000637979 90 ntBASIC1.34□□□□□ -2.19
RHBDL3P58872 AC008163.1-202ENST00000636004 2889 ntBASIC1.34□□□□□ -2.2
RHBDL3P58872 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 RNU6-713P-201ENST00000384761 107 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 BTF3P11-201ENST00000426582 477 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 SERF1AP1-201ENST00000514575 187 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 SCARNA8-201ENST00000515924 131 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 MIR4662B-201ENST00000579498 81 ntBASIC1.33□□□□□ -2.2
RHBDL3P58872 Y_RNA.293-201ENST00000364908 93 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.32□□□□□ -2.2
RHBDL3P58872 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.32□□□□□ -2.2
RHBDL3P58872 uc_338.4-201ENST00000616635 176 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.32□□□□□ -2.2
RHBDL3P58872 UBE2WP1-201ENST00000362030 340 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 Y_RNA.64-201ENST00000362845 102 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 Y_RNA.84-201ENST00000363011 104 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 Y_RNA.217-201ENST00000364214 105 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 MIR215-201ENST00000384858 110 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 MIR520E-201ENST00000384867 87 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 MIR526A2-201ENST00000390198 65 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 U8.17-201ENST00000391292 132 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDL3P58872 Y_RNA.641-201ENST00000459414 105 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.31□□□□□ -2.2
RHBDL3P58872 AL442663.2-201ENST00000554385 511 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 AC015726.2-201ENST00000620112 122 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDL3P58872 MIR4251-201ENST00000635819 61 ntBASIC1.31□□□□□ -2.2
RHBDL3P58872 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RHBDL3P58872 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RHBDL3P58872 SNORD72-201ENST00000390994 80 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 AC087343.1-201ENST00000477341 475 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 RPS26P48-201ENST00000491713 339 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.3□□□□□ -2.2
RHBDL3P58872 AP003716.2-201ENST00000528260 108 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 AC006504.6-201ENST00000590142 199 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 Y_RNA.802-201ENST00000614892 130 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 RMST_2.1-201ENST00000617263 136 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 SEPT14P17-201ENST00000617978 177 ntBASIC1.3□□□□□ -2.2
RHBDL3P58872 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
RHBDL3P58872 RNU6-806P-201ENST00000365147 105 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 RNU6-1138P-201ENST00000365359 106 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 RNU6-42P-201ENST00000384165 107 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 RNU6-662P-201ENST00000384253 104 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 AL603910.2-201ENST00000407268 136 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.29□□□□□ -2.2
RHBDL3P58872 RN7SKP164-201ENST00000516138 266 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 RNU6-1338P-201ENST00000516328 91 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 MIR548AR-201ENST00000582191 57 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 AC022140.2-201ENST00000623500 188 ntBASIC1.29□□□□□ -2.2
RHBDL3P58872 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 RNU6-1203P-201ENST00000410703 110 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 AC107297.1-201ENST00000459991 176 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 RNU7-149P-201ENST00000516739 59 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.28□□□□□ -2.2
RHBDL3P58872 AC006006.1-201ENST00000603082 144 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
RHBDL3P58872 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
RHBDL3P58872 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.27□□□□□ -2.21
RHBDL3P58872 POLR2J4-204ENST00000418424 324 ntBASIC1.27□□□□□ -2.21
RHBDL3P58872 RNU6-1137P-201ENST00000517073 99 ntBASIC1.27□□□□□ -2.21
RHBDL3P58872 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
RHBDL3P58872 MIR373-201ENST00000362273 69 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 RNU6-1109P-201ENST00000391187 107 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 RNU6-383P-201ENST00000410864 94 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 RNU6-847P-201ENST00000411115 108 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.26□□□□□ -2.21
RHBDL3P58872 PDCD5P2-201ENST00000507570 312 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.26□□□□□ -2.21
RHBDL3P58872 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 snoU18.1-201ENST00000629629 71 ntBASIC1.26□□□□□ -2.21
RHBDL3P58872 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
RHBDL3P58872 Y_RNA.275-201ENST00000364726 110 ntBASIC1.25□□□□□ -2.21
RHBDL3P58872 SNORA51.10-201ENST00000384418 136 ntBASIC1.25□□□□□ -2.21
RHBDL3P58872 SNORA8.3-201ENST00000384679 139 ntBASIC1.25□□□□□ -2.21
RHBDL3P58872 TRBVB-201ENST00000477100 408 ntBASIC1.25□□□□□ -2.21
RHBDL3P58872 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RHBDL3P58872 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RHBDL3P58872 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
RHBDL3P58872 Y_RNA.16-201ENST00000362421 102 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 Y_RNA.26-201ENST00000362539 101 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 SNORA63-201ENST00000363450 132 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 SNORD28B-201ENST00000390993 75 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.24□□□□□ -2.21
RHBDL3P58872 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
RHBDL3P58872 SNORD77.4-201ENST00000516158 81 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms