Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL365434.2-201ENST00000607979 234 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SUMO3P55854 Y_RNA.66-201ENST00000362862 102 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 Y_RNA.240-201ENST00000364469 95 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 MIR516B2-201ENST00000385190 85 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 AL451046.2-201ENST00000403074 277 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 MIR4431-201ENST00000579990 94 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
SUMO3P55854 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SUMO3P55854 Y_RNA.91-201ENST00000363042 107 ntBASIC1.71□□□□□ -2.14
SUMO3P55854 RNU6-682P-201ENST00000363843 106 ntBASIC1.71□□□□□ -2.14
SUMO3P55854 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
SUMO3P55854 RNU6-861P-201ENST00000516745 106 ntBASIC1.71□□□□□ -2.14
SUMO3P55854 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
SUMO3P55854 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.7□□□□□ -2.14
SUMO3P55854 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 RNU6-643P-201ENST00000384018 107 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 SNORD61-201ENST00000384252 73 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 MIR548O-201ENST00000408583 114 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 Y_RNA.662-201ENST00000516028 97 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 RNU6-693P-201ENST00000516134 107 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 MIR3937-201ENST00000580135 106 ntBASIC1.7□□□□□ -2.14
SUMO3P55854 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
SUMO3P55854 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
SUMO3P55854 Y_RNA.547-201ENST00000384654 119 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RNU6-907P-201ENST00000390924 102 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 UBL5P3-201ENST00000475112 231 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RN7SL429P-201ENST00000479090 223 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RN7SL489P-201ENST00000486185 223 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RN7SL327P-201ENST00000488659 223 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC005840.1-201ENST00000498412 377 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.69□□□□□ -2.14
SUMO3P55854 RNA5SP445-201ENST00000515889 115 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RNU7-25P-201ENST00000516544 62 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 SNORA74.3-201ENST00000517108 154 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SUMO3P55854 MIR378D2-201ENST00000580636 98 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC098479.1-201ENST00000609225 154 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 GHRLOS.1-201ENST00000610995 70 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 RN7SL853P-201ENST00000617250 223 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 AC015726.2-201ENST00000620112 122 ntBASIC1.69□□□□□ -2.14
SUMO3P55854 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SUMO3P55854 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
SUMO3P55854 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.68□□□□□ -2.14
SUMO3P55854 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.68□□□□□ -2.14
SUMO3P55854 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
SUMO3P55854 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
SUMO3P55854 FTX_2.1-201ENST00000618816 94 ntBASIC1.68□□□□□ -2.14
SUMO3P55854 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
SUMO3P55854 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SUMO3P55854 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
SUMO3P55854 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SUMO3P55854 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 Y_RNA.357-201ENST00000365487 109 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 MIR548A2-201ENST00000384956 97 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 SNORD41-201ENST00000386967 70 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SUMO3P55854 SNORD123-201ENST00000459473 70 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 RNU4-57P-201ENST00000515980 135 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 SNORD116-25-201ENST00000516517 92 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 AC007751.1-201ENST00000529260 376 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
SUMO3P55854 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SUMO3P55854 SNORD115-28-201ENST00000363931 81 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 MIR518F-201ENST00000384973 87 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 U8.17-201ENST00000391292 132 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 AC006461.1-201ENST00000412637 326 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 SNORA18.7-201ENST00000516910 131 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 RNA5SP364-201ENST00000516938 78 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 AC134878.1-201ENST00000619901 243 ntBASIC1.66□□□□□ -2.14
SUMO3P55854 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SUMO3P55854 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SUMO3P55854 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
SUMO3P55854 Y_RNA.270-201ENST00000364693 104 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 SNORA1.2-201ENST00000365189 134 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 Y_RNA.441-201ENST00000384123 112 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 RPS27P16-201ENST00000425758 201 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 SEPT7P4-201ENST00000437076 306 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 AC107027.2-201ENST00000512197 115 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 RNU6-1270P-201ENST00000517128 108 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 MIR3664-201ENST00000579074 99 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 AC012493.3-201ENST00000604494 112 ntBASIC1.65□□□□□ -2.15
SUMO3P55854 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SUMO3P55854 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SUMO3P55854 RNU6-978P-201ENST00000364371 103 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 Y_RNA.542-201ENST00000384641 111 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.64□□□□□ -2.15
SUMO3P55854 snoU13.15-201ENST00000459407 104 ntBASIC1.64□□□□□ -2.15
SUMO3P55854 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms