Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.66-201ENST00000362862 102 ntBASIC1.56□□□□□ -2.16
CDH12P55289 Y_RNA.180-201ENST00000363867 113 ntBASIC1.56□□□□□ -2.16
CDH12P55289 RNA5SP126-201ENST00000365092 109 ntBASIC1.56□□□□□ -2.16
CDH12P55289 RNU6-209P-201ENST00000384118 107 ntBASIC1.56□□□□□ -2.16
CDH12P55289 Y_RNA.441-201ENST00000384123 112 ntBASIC1.56□□□□□ -2.16
CDH12P55289 MIR583-201ENST00000384846 75 ntBASIC1.56□□□□□ -2.16
CDH12P55289 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
CDH12P55289 RNU6-1135P-201ENST00000411083 103 ntBASIC1.56□□□□□ -2.16
CDH12P55289 UBL5P3-201ENST00000475112 231 ntBASIC1.56□□□□□ -2.16
CDH12P55289 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
CDH12P55289 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
CDH12P55289 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
CDH12P55289 AC106754.2-201ENST00000623006 233 ntBASIC1.56□□□□□ -2.16
CDH12P55289 AL442644.1-201ENST00000454390 3105 ntBASIC1.56□□□□□ -2.16
CDH12P55289 SNORD61-201ENST00000384252 73 ntBASIC1.55□□□□□ -2.16
CDH12P55289 MIR513A1-201ENST00000385138 129 ntBASIC1.55□□□□□ -2.16
CDH12P55289 AC006461.1-201ENST00000412637 326 ntBASIC1.55□□□□□ -2.16
CDH12P55289 RNU6-365P-201ENST00000517113 106 ntBASIC1.55□□□□□ -2.16
CDH12P55289 AC090142.3-201ENST00000519012 385 ntBASIC1.55□□□□□ -2.16
CDH12P55289 DEFB122-202ENST00000569013 197 ntBASIC1.55□□□□□ -2.16
CDH12P55289 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH12P55289 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDH12P55289 RNU4-84P-201ENST00000364200 139 ntBASIC1.54□□□□□ -2.16
CDH12P55289 Y_RNA.242-201ENST00000364473 110 ntBASIC1.54□□□□□ -2.16
CDH12P55289 MIR548A2-201ENST00000384956 97 ntBASIC1.54□□□□□ -2.16
CDH12P55289 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
CDH12P55289 MIR516B2-201ENST00000385190 85 ntBASIC1.54□□□□□ -2.16
CDH12P55289 SNORA79-201ENST00000408376 140 ntBASIC1.54□□□□□ -2.16
CDH12P55289 AC015922.2-201ENST00000435593 184 ntBASIC1.54□□□□□ -2.16
CDH12P55289 RNU6-917P-201ENST00000516294 104 ntBASIC1.54□□□□□ -2.16
CDH12P55289 RNU6-126P-201ENST00000516685 103 ntBASIC1.54□□□□□ -2.16
CDH12P55289 AC007751.1-201ENST00000529260 376 ntBASIC1.54□□□□□ -2.16
CDH12P55289 AC104465.1-201ENST00000611365 139 ntBASIC1.54□□□□□ -2.16
CDH12P55289 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
CDH12P55289 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.54□□□□□ -2.16
CDH12P55289 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDH12P55289 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
CDH12P55289 RNU6-199P-201ENST00000362954 107 ntBASIC1.53□□□□□ -2.16
CDH12P55289 RNU6-978P-201ENST00000364371 103 ntBASIC1.53□□□□□ -2.16
CDH12P55289 RNA5SP259-201ENST00000365541 109 ntBASIC1.53□□□□□ -2.16
CDH12P55289 SNORD24-201ENST00000383884 75 ntBASIC1.53□□□□□ -2.16
CDH12P55289 MIR452-201ENST00000385020 85 ntBASIC1.53□□□□□ -2.16
CDH12P55289 U8.13-201ENST00000390842 128 ntBASIC1.53□□□□□ -2.16
CDH12P55289 RNU6-394P-201ENST00000410735 107 ntBASIC1.53□□□□□ -2.16
CDH12P55289 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
CDH12P55289 AC005840.1-201ENST00000498412 377 ntBASIC1.53□□□□□ -2.16
CDH12P55289 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
CDH12P55289 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.53□□□□□ -2.16
CDH12P55289 MIR378D2-201ENST00000580636 98 ntBASIC1.53□□□□□ -2.16
CDH12P55289 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.53□□□□□ -2.16
CDH12P55289 RNU6-888P-201ENST00000363010 101 ntBASIC1.52□□□□□ -2.17
CDH12P55289 Y_RNA.272-201ENST00000364696 102 ntBASIC1.52□□□□□ -2.17
CDH12P55289 Y_RNA.357-201ENST00000365487 109 ntBASIC1.52□□□□□ -2.17
CDH12P55289 RNU6-804P-201ENST00000384286 107 ntBASIC1.52□□□□□ -2.17
CDH12P55289 MIR518F-201ENST00000384973 87 ntBASIC1.52□□□□□ -2.17
CDH12P55289 RNU6-239P-201ENST00000390990 99 ntBASIC1.52□□□□□ -2.17
CDH12P55289 SNORA26-201ENST00000391286 122 ntBASIC1.52□□□□□ -2.17
CDH12P55289 MIR548O-201ENST00000408583 114 ntBASIC1.52□□□□□ -2.17
CDH12P55289 AC092991.1-201ENST00000477176 376 ntBASIC1.52□□□□□ -2.17
CDH12P55289 AC107027.2-201ENST00000512197 115 ntBASIC1.52□□□□□ -2.17
CDH12P55289 RNU6-504P-201ENST00000516568 104 ntBASIC1.52□□□□□ -2.17
CDH12P55289 RNU6-1270P-201ENST00000517128 108 ntBASIC1.52□□□□□ -2.17
CDH12P55289 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
CDH12P55289 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.51□□□□□ -2.17
CDH12P55289 SNORD38C-201ENST00000384381 69 ntBASIC1.51□□□□□ -2.17
CDH12P55289 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
CDH12P55289 snoU13.9-201ENST00000458927 103 ntBASIC1.51□□□□□ -2.17
CDH12P55289 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
CDH12P55289 RNU7-121P-201ENST00000516604 62 ntBASIC1.51□□□□□ -2.17
CDH12P55289 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
CDH12P55289 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
CDH12P55289 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
CDH12P55289 MIR6845-201ENST00000613182 61 ntBASIC1.51□□□□□ -2.17
CDH12P55289 AC015726.2-201ENST00000620112 122 ntBASIC1.51□□□□□ -2.17
CDH12P55289 MIR8063-201ENST00000621930 81 ntBASIC1.51□□□□□ -2.17
CDH12P55289 RNU6-1130P-201ENST00000365434 107 ntBASIC1.5□□□□□ -2.17
CDH12P55289 SNORA1-201ENST00000384107 130 ntBASIC1.5□□□□□ -2.17
CDH12P55289 MIR653-201ENST00000385279 96 ntBASIC1.5□□□□□ -2.17
CDH12P55289 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
CDH12P55289 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.5□□□□□ -2.17
CDH12P55289 RNU6-830P-201ENST00000516353 107 ntBASIC1.5□□□□□ -2.17
CDH12P55289 MIR3144-201ENST00000579460 79 ntBASIC1.5□□□□□ -2.17
CDH12P55289 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
CDH12P55289 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDH12P55289 RNU6-818P-201ENST00000364837 108 ntBASIC1.49□□□□□ -2.17
CDH12P55289 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
CDH12P55289 Y_RNA.464-201ENST00000384282 110 ntBASIC1.49□□□□□ -2.17
CDH12P55289 RNU6-768P-201ENST00000384683 107 ntBASIC1.49□□□□□ -2.17
CDH12P55289 MIR136-201ENST00000385207 82 ntBASIC1.49□□□□□ -2.17
CDH12P55289 RNU4-57P-201ENST00000515980 135 ntBASIC1.49□□□□□ -2.17
CDH12P55289 SNORD116-25-201ENST00000516517 92 ntBASIC1.49□□□□□ -2.17
CDH12P55289 RNU6-255P-201ENST00000516957 105 ntBASIC1.49□□□□□ -2.17
CDH12P55289 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
CDH12P55289 AL365434.2-201ENST00000607979 234 ntBASIC1.49□□□□□ -2.17
CDH12P55289 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH12P55289 AC021753.1-201ENST00000635724 168 ntBASIC1.49□□□□□ -2.17
CDH12P55289 MIR3658-201ENST00000636291 56 ntBASIC1.49□□□□□ -2.17
CDH12P55289 Y_RNA.8-201ENST00000362353 102 ntBASIC1.48□□□□□ -2.17
CDH12P55289 Y_RNA.337-201ENST00000365312 102 ntBASIC1.48□□□□□ -2.17
CDH12P55289 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms