Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
COPB1P53618 MIR378D2-201ENST00000580636 98 ntBASIC1.88□□□□□ -2.11
COPB1P53618 SNORA28-201ENST00000606769 126 ntBASIC1.88□□□□□ -2.11
COPB1P53618 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.88□□□□□ -2.11
COPB1P53618 ZNF702P-202ENST00000434269 1966 ntBASIC1.88□□□□□ -2.11
COPB1P53618 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
COPB1P53618 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
COPB1P53618 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COPB1P53618 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COPB1P53618 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
COPB1P53618 RNU6-978P-201ENST00000364371 103 ntBASIC1.87□□□□□ -2.11
COPB1P53618 RNA5SP363-201ENST00000365072 115 ntBASIC1.87□□□□□ -2.11
COPB1P53618 Y_RNA.337-201ENST00000365312 102 ntBASIC1.87□□□□□ -2.11
COPB1P53618 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
COPB1P53618 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
COPB1P53618 SNRPGP14-201ENST00000435400 219 ntBASIC1.87□□□□□ -2.11
COPB1P53618 RNU6-346P-201ENST00000516288 111 ntBASIC1.87□□□□□ -2.11
COPB1P53618 Y_RNA.714-201ENST00000517065 90 ntBASIC1.87□□□□□ -2.11
COPB1P53618 DNAJC19P2-201ENST00000593340 302 ntBASIC1.87□□□□□ -2.11
COPB1P53618 Y_RNA.778-201ENST00000620203 90 ntBASIC1.87□□□□□ -2.11
COPB1P53618 Y_RNA.66-201ENST00000362862 102 ntBASIC1.86□□□□□ -2.11
COPB1P53618 AL034345.1-201ENST00000407768 123 ntBASIC1.86□□□□□ -2.11
COPB1P53618 SNORA79-201ENST00000408376 140 ntBASIC1.86□□□□□ -2.11
COPB1P53618 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.86□□□□□ -2.11
COPB1P53618 AC099513.1-201ENST00000490423 301 ntBASIC1.86□□□□□ -2.11
COPB1P53618 RNU6-126P-201ENST00000516685 103 ntBASIC1.86□□□□□ -2.11
COPB1P53618 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
COPB1P53618 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
COPB1P53618 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
COPB1P53618 MTND1P7-201ENST00000632801 297 ntBASIC1.86□□□□□ -2.11
COPB1P53618 MIR3658-201ENST00000636291 56 ntBASIC1.86□□□□□ -2.11
COPB1P53618 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-597P-201ENST00000365620 102 ntBASIC1.85□□□□□ -2.11
COPB1P53618 Y_RNA.400-201ENST00000383963 111 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-187P-201ENST00000384139 106 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-424P-201ENST00000384367 105 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-768P-201ENST00000384683 107 ntBASIC1.85□□□□□ -2.11
COPB1P53618 U8.16-201ENST00000391279 133 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU2-70P-201ENST00000410718 179 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
COPB1P53618 CALM2P4-201ENST00000430810 426 ntBASIC1.85□□□□□ -2.11
COPB1P53618 AL392103.1-201ENST00000447000 198 ntBASIC1.85□□□□□ -2.11
COPB1P53618 snoU13.27-201ENST00000459278 104 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-1053P-201ENST00000515930 101 ntBASIC1.85□□□□□ -2.11
COPB1P53618 SNORD45.4-201ENST00000516629 73 ntBASIC1.85□□□□□ -2.11
COPB1P53618 RNU6-1116P-201ENST00000517269 99 ntBASIC1.85□□□□□ -2.11
COPB1P53618 AC021506.2-201ENST00000612354 169 ntBASIC1.85□□□□□ -2.11
COPB1P53618 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.11
COPB1P53618 AL442644.1-201ENST00000454390 3105 ntBASIC1.84□□□□□ -2.11
COPB1P53618 Y_RNA.164-201ENST00000363709 102 ntBASIC1.84□□□□□ -2.11
COPB1P53618 RNU6-151P-201ENST00000364158 107 ntBASIC1.84□□□□□ -2.11
COPB1P53618 Y_RNA.393-201ENST00000383936 102 ntBASIC1.84□□□□□ -2.11
COPB1P53618 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.84□□□□□ -2.11
COPB1P53618 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
COPB1P53618 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
COPB1P53618 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
COPB1P53618 SNORD116-25-201ENST00000516517 92 ntBASIC1.84□□□□□ -2.11
COPB1P53618 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
COPB1P53618 RNA5SP168-201ENST00000516642 112 ntBASIC1.84□□□□□ -2.11
COPB1P53618 AC120024.3-201ENST00000603167 156 ntBASIC1.84□□□□□ -2.11
COPB1P53618 AC027279.3-201ENST00000625055 122 ntBASIC1.84□□□□□ -2.11
COPB1P53618 Y_RNA.215-201ENST00000364204 112 ntBASIC1.83□□□□□ -2.12
COPB1P53618 Y_RNA.242-201ENST00000364473 110 ntBASIC1.83□□□□□ -2.12
COPB1P53618 snoU2-30.1-201ENST00000365012 70 ntBASIC1.83□□□□□ -2.12
COPB1P53618 SNORD24-201ENST00000383884 75 ntBASIC1.83□□□□□ -2.12
COPB1P53618 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
COPB1P53618 RNA5SP212-201ENST00000391223 107 ntBASIC1.83□□□□□ -2.12
COPB1P53618 AC114811.1-201ENST00000507207 168 ntBASIC1.83□□□□□ -2.12
COPB1P53618 Y_RNA.666-201ENST00000516187 112 ntBASIC1.83□□□□□ -2.12
COPB1P53618 RNU6-365P-201ENST00000517113 106 ntBASIC1.83□□□□□ -2.12
COPB1P53618 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.83□□□□□ -2.12
COPB1P53618 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
COPB1P53618 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
COPB1P53618 MIR3646-201ENST00000578301 84 ntBASIC1.83□□□□□ -2.12
COPB1P53618 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
COPB1P53618 AC006441.5-201ENST00000612680 209 ntBASIC1.83□□□□□ -2.12
COPB1P53618 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
COPB1P53618 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
COPB1P53618 RNU6-1084P-201ENST00000362498 107 ntBASIC1.82□□□□□ -2.12
COPB1P53618 RNU6-268P-201ENST00000364174 107 ntBASIC1.82□□□□□ -2.12
COPB1P53618 Y_RNA.336-201ENST00000365307 109 ntBASIC1.82□□□□□ -2.12
COPB1P53618 SNORD61-201ENST00000384252 73 ntBASIC1.82□□□□□ -2.12
COPB1P53618 Y_RNA.521-201ENST00000384560 114 ntBASIC1.82□□□□□ -2.12
COPB1P53618 RPL30P13-201ENST00000418873 348 ntBASIC1.82□□□□□ -2.12
COPB1P53618 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.82□□□□□ -2.12
COPB1P53618 CYCTP-201ENST00000504253 315 ntBASIC1.82□□□□□ -2.12
COPB1P53618 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
COPB1P53618 RNU6-504P-201ENST00000516568 104 ntBASIC1.82□□□□□ -2.12
COPB1P53618 AC007751.1-201ENST00000529260 376 ntBASIC1.82□□□□□ -2.12
COPB1P53618 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.82□□□□□ -2.12
COPB1P53618 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
COPB1P53618 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
COPB1P53618 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
COPB1P53618 MIR337-201ENST00000362281 93 ntBASIC1.81□□□□□ -2.12
COPB1P53618 RNU6-888P-201ENST00000363010 101 ntBASIC1.81□□□□□ -2.12
COPB1P53618 SNORD14E-201ENST00000364009 85 ntBASIC1.81□□□□□ -2.12
COPB1P53618 RNU4-11P-201ENST00000365287 132 ntBASIC1.81□□□□□ -2.12
COPB1P53618 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
COPB1P53618 MIR548A2-201ENST00000384956 97 ntBASIC1.81□□□□□ -2.12
COPB1P53618 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms