Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 Y_RNA.235-201ENST00000364412 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.306-201ENST00000365015 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.312-201ENST00000365089 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.322-201ENST00000365151 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.459-201ENST00000384251 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 SNORA36B-201ENST00000410438 131 ntBASIC1.3□□□□□ -2.2
LBX1P52954 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.3□□□□□ -2.2
LBX1P52954 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.650-201ENST00000459002 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 RNU6-437P-201ENST00000459408 95 ntBASIC1.3□□□□□ -2.2
LBX1P52954 RNU6-917P-201ENST00000516294 104 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.777-201ENST00000516982 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 DEFB108E-201ENST00000524692 240 ntBASIC1.3□□□□□ -2.2
LBX1P52954 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
LBX1P52954 MIR4282-201ENST00000583613 67 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.771-201ENST00000598668 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
LBX1P52954 Y_RNA.789-201ENST00000622480 102 ntBASIC1.3□□□□□ -2.2
LBX1P52954 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
LBX1P52954 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
LBX1P52954 RNU6-662P-201ENST00000384253 104 ntBASIC1.29□□□□□ -2.2
LBX1P52954 MIR526A1-201ENST00000384897 85 ntBASIC1.29□□□□□ -2.2
LBX1P52954 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
LBX1P52954 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
LBX1P52954 SNRPGP14-201ENST00000435400 219 ntBASIC1.29□□□□□ -2.2
LBX1P52954 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
LBX1P52954 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
LBX1P52954 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
LBX1P52954 AL161722.3-201ENST00000605789 2983 ntBASIC1.29□□□□□ -2.2
LBX1P52954 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
LBX1P52954 SNORD58.1-201ENST00000391313 66 ntBASIC1.28□□□□□ -2.2
LBX1P52954 MTND3P2-201ENST00000438452 342 ntBASIC1.28□□□□□ -2.2
LBX1P52954 RPL23AP54-201ENST00000495129 419 ntBASIC1.28□□□□□ -2.2
LBX1P52954 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.28□□□□□ -2.2
LBX1P52954 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
LBX1P52954 SUMO2P16-201ENST00000519475 264 ntBASIC1.28□□□□□ -2.2
LBX1P52954 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.28□□□□□ -2.2
LBX1P52954 MIR4778-201ENST00000577635 80 ntBASIC1.28□□□□□ -2.2
LBX1P52954 MIR4714-201ENST00000580728 77 ntBASIC1.28□□□□□ -2.2
LBX1P52954 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.28□□□□□ -2.2
LBX1P52954 AC087685.1-201ENST00000587507 141 ntBASIC1.28□□□□□ -2.2
LBX1P52954 AC011921.3-201ENST00000605540 361 ntBASIC1.28□□□□□ -2.2
LBX1P52954 MIR6513-201ENST00000621188 64 ntBASIC1.28□□□□□ -2.2
LBX1P52954 AC134026.1-201ENST00000623249 2239 ntBASIC1.28□□□□□ -2.2
LBX1P52954 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
LBX1P52954 Y_RNA.44-201ENST00000362676 108 ntBASIC1.27□□□□□ -2.21
LBX1P52954 RNU6-1209P-201ENST00000363655 107 ntBASIC1.27□□□□□ -2.21
LBX1P52954 RNU6-514P-201ENST00000384208 107 ntBASIC1.27□□□□□ -2.21
LBX1P52954 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
LBX1P52954 AL118496.2-201ENST00000448300 230 ntBASIC1.27□□□□□ -2.21
LBX1P52954 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
LBX1P52954 AC100767.1-201ENST00000528178 123 ntBASIC1.27□□□□□ -2.21
LBX1P52954 AC037487.3-201ENST00000606668 112 ntBASIC1.27□□□□□ -2.21
LBX1P52954 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.27□□□□□ -2.21
LBX1P52954 snoU18.1-201ENST00000629629 71 ntBASIC1.27□□□□□ -2.21
LBX1P52954 RNU6-740P-201ENST00000364734 105 ntBASIC1.26□□□□□ -2.21
LBX1P52954 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MIR526A2-201ENST00000390198 65 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MIR936-201ENST00000401264 98 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MTCO2P33-201ENST00000402100 465 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MIR1197-201ENST00000408818 88 ntBASIC1.26□□□□□ -2.21
LBX1P52954 BTF3P11-201ENST00000426582 477 ntBASIC1.26□□□□□ -2.21
LBX1P52954 SNRPGP10-201ENST00000432323 225 ntBASIC1.26□□□□□ -2.21
LBX1P52954 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
LBX1P52954 SNORD127-201ENST00000458892 86 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AC114811.1-201ENST00000507207 168 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MTND1P19-201ENST00000511780 315 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AL512310.8-201ENST00000550183 120 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AC090049.2-201ENST00000550377 109 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MIR5692C2-201ENST00000577959 77 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AC008507.4-201ENST00000585464 127 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AC012433.1-201ENST00000588916 398 ntBASIC1.26□□□□□ -2.21
LBX1P52954 AL512605.2-201ENST00000592972 256 ntBASIC1.26□□□□□ -2.21
LBX1P52954 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
LBX1P52954 SNORD68-201ENST00000363214 84 ntBASIC1.25□□□□□ -2.21
LBX1P52954 RNU6-238P-201ENST00000363313 106 ntBASIC1.25□□□□□ -2.21
LBX1P52954 SNORD50B-201ENST00000364995 70 ntBASIC1.25□□□□□ -2.21
LBX1P52954 RNU6-1289P-201ENST00000384431 106 ntBASIC1.25□□□□□ -2.21
LBX1P52954 Y_RNA.556-201ENST00000384677 113 ntBASIC1.25□□□□□ -2.21
LBX1P52954 MIR891A-201ENST00000401237 79 ntBASIC1.25□□□□□ -2.21
LBX1P52954 MIR1265-201ENST00000408444 86 ntBASIC1.25□□□□□ -2.21
LBX1P52954 MIR1302-6-201ENST00000408466 90 ntBASIC1.25□□□□□ -2.21
LBX1P52954 RNU2-38P-201ENST00000410856 79 ntBASIC1.25□□□□□ -2.21
LBX1P52954 RNU6-651P-201ENST00000411040 105 ntBASIC1.25□□□□□ -2.21
LBX1P52954 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
LBX1P52954 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.25□□□□□ -2.21
LBX1P52954 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.25□□□□□ -2.21
LBX1P52954 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
LBX1P52954 MIR5688-201ENST00000580619 83 ntBASIC1.25□□□□□ -2.21
LBX1P52954 AL513534.2-201ENST00000603836 250 ntBASIC1.25□□□□□ -2.21
LBX1P52954 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
LBX1P52954 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.25□□□□□ -2.21
LBX1P52954 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LBX1P52954 Y_RNA.117-201ENST00000363294 101 ntBASIC1.24□□□□□ -2.21
LBX1P52954 Y_RNA.336-201ENST00000365307 109 ntBASIC1.24□□□□□ -2.21
LBX1P52954 Y_RNA.352-201ENST00000365439 102 ntBASIC1.24□□□□□ -2.21
LBX1P52954 RNA5SP259-201ENST00000365541 109 ntBASIC1.24□□□□□ -2.21
LBX1P52954 RNU6-211P-201ENST00000384047 107 ntBASIC1.24□□□□□ -2.21
LBX1P52954 AL603910.2-201ENST00000407268 136 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms