Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC007485.1-201ENST00000616755 206 ntBASIC0.74□□□□□ -2.29
SMSP52788 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
SMSP52788 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
SMSP52788 Y_RNA.183-201ENST00000363882 113 ntBASIC0.73□□□□□ -2.29
SMSP52788 RNU6-899P-201ENST00000363947 107 ntBASIC0.73□□□□□ -2.29
SMSP52788 SNORD113.3-201ENST00000364630 78 ntBASIC0.73□□□□□ -2.29
SMSP52788 Y_RNA.424-201ENST00000384063 103 ntBASIC0.73□□□□□ -2.29
SMSP52788 MIR193B-201ENST00000384907 83 ntBASIC0.73□□□□□ -2.29
SMSP52788 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.73□□□□□ -2.29
SMSP52788 MTND4P19-201ENST00000446659 478 ntBASIC0.73□□□□□ -2.29
SMSP52788 RPL23AP91-201ENST00000569211 455 ntBASIC0.73□□□□□ -2.29
SMSP52788 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
SMSP52788 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
SMSP52788 AC090971.5-201ENST00000621102 293 ntBASIC0.73□□□□□ -2.29
SMSP52788 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
SMSP52788 MIR6516-201ENST00000630554 81 ntBASIC0.73□□□□□ -2.29
SMSP52788 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
SMSP52788 SNORA1.2-201ENST00000365189 134 ntBASIC0.72□□□□□ -2.29
SMSP52788 Y_RNA.418-201ENST00000384029 102 ntBASIC0.72□□□□□ -2.29
SMSP52788 Y_RNA.445-201ENST00000384168 102 ntBASIC0.72□□□□□ -2.29
SMSP52788 SNORD115-46-201ENST00000390982 71 ntBASIC0.72□□□□□ -2.29
SMSP52788 SNORA26.5-201ENST00000391215 123 ntBASIC0.72□□□□□ -2.29
SMSP52788 AL603910.2-201ENST00000407268 136 ntBASIC0.72□□□□□ -2.29
SMSP52788 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
SMSP52788 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
SMSP52788 MIR4300-201ENST00000581016 96 ntBASIC0.72□□□□□ -2.29
SMSP52788 MIR6513-201ENST00000621188 64 ntBASIC0.72□□□□□ -2.29
SMSP52788 SNORD113-8-201ENST00000363497 74 ntBASIC0.71□□□□□ -2.3
SMSP52788 RNU6-1048P-201ENST00000364054 107 ntBASIC0.71□□□□□ -2.3
SMSP52788 SNORD89-201ENST00000390981 114 ntBASIC0.71□□□□□ -2.3
SMSP52788 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
SMSP52788 AC098869.1-201ENST00000481627 292 ntBASIC0.71□□□□□ -2.3
SMSP52788 RNU2-13P-201ENST00000515909 113 ntBASIC0.71□□□□□ -2.3
SMSP52788 RNU6-496P-201ENST00000516145 99 ntBASIC0.71□□□□□ -2.3
SMSP52788 MIR2115-201ENST00000516657 100 ntBASIC0.71□□□□□ -2.3
SMSP52788 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.71□□□□□ -2.3
SMSP52788 C8orf59P2-201ENST00000603441 271 ntBASIC0.71□□□□□ -2.3
SMSP52788 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
SMSP52788 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
SMSP52788 Y_RNA.804-201ENST00000615262 101 ntBASIC0.71□□□□□ -2.3
SMSP52788 MIR376A1-201ENST00000616574 68 ntBASIC0.71□□□□□ -2.3
SMSP52788 AC090574.1-201ENST00000623186 233 ntBASIC0.71□□□□□ -2.3
SMSP52788 RNU4-90P-201ENST00000362773 141 ntBASIC0.7□□□□□ -2.3
SMSP52788 SNORD72-201ENST00000390994 80 ntBASIC0.7□□□□□ -2.3
SMSP52788 MTCO2P33-201ENST00000402100 465 ntBASIC0.7□□□□□ -2.3
SMSP52788 AC022028.1-201ENST00000412054 408 ntBASIC0.7□□□□□ -2.3
SMSP52788 HSPE1P25-201ENST00000455484 251 ntBASIC0.7□□□□□ -2.3
SMSP52788 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
SMSP52788 RNU4-57P-201ENST00000515980 135 ntBASIC0.7□□□□□ -2.3
SMSP52788 RNU6-1046P-201ENST00000516538 107 ntBASIC0.7□□□□□ -2.3
SMSP52788 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.7□□□□□ -2.3
SMSP52788 MIR1273G-201ENST00000577677 100 ntBASIC0.7□□□□□ -2.3
SMSP52788 Y_RNA.168-201ENST00000363740 102 ntBASIC0.69□□□□□ -2.3
SMSP52788 RNU6-396P-201ENST00000365369 105 ntBASIC0.69□□□□□ -2.3
SMSP52788 SNORA51.10-201ENST00000384418 136 ntBASIC0.69□□□□□ -2.3
SMSP52788 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
SMSP52788 MT-TN-201ENST00000387400 73 ntBASIC0.69□□□□□ -2.3
SMSP52788 Y_RNA.645-201ENST00000391229 102 ntBASIC0.69□□□□□ -2.3
SMSP52788 MIR1278-201ENST00000408753 81 ntBASIC0.69□□□□□ -2.3
SMSP52788 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.69□□□□□ -2.3
SMSP52788 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.69□□□□□ -2.3
SMSP52788 MTND4LP30-201ENST00000454092 297 ntBASIC0.69□□□□□ -2.3
SMSP52788 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
SMSP52788 SCARNA8-201ENST00000515924 131 ntBASIC0.69□□□□□ -2.3
SMSP52788 RNU6-764P-201ENST00000516396 105 ntBASIC0.69□□□□□ -2.3
SMSP52788 Y_RNA.715-201ENST00000517082 110 ntBASIC0.69□□□□□ -2.3
SMSP52788 Y_RNA.721-201ENST00000517207 102 ntBASIC0.69□□□□□ -2.3
SMSP52788 AC124312.5-201ENST00000604451 268 ntBASIC0.69□□□□□ -2.3
SMSP52788 AC022140.2-201ENST00000623500 188 ntBASIC0.69□□□□□ -2.3
SMSP52788 MIR377-201ENST00000362145 69 ntBASIC0.68□□□□□ -2.3
SMSP52788 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
SMSP52788 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
SMSP52788 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
SMSP52788 RNA5SP496-201ENST00000391240 109 ntBASIC0.68□□□□□ -2.3
SMSP52788 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
SMSP52788 MIR1252-201ENST00000408861 65 ntBASIC0.68□□□□□ -2.3
SMSP52788 AL021707.8-201ENST00000609428 183 ntBASIC0.68□□□□□ -2.3
SMSP52788 RNU6-654P-201ENST00000364373 107 ntBASIC0.67□□□□□ -2.3
SMSP52788 Y_RNA.813-201ENST00000364639 102 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNU6-580P-201ENST00000365159 107 ntBASIC0.67□□□□□ -2.3
SMSP52788 Y_RNA.569-201ENST00000384749 103 ntBASIC0.67□□□□□ -2.3
SMSP52788 Y_RNA.581-201ENST00000391017 97 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNU6-823P-201ENST00000391042 103 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNU6-847P-201ENST00000411115 108 ntBASIC0.67□□□□□ -2.3
SMSP52788 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
SMSP52788 AC023449.1-201ENST00000454464 154 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNU6-897P-201ENST00000517135 105 ntBASIC0.67□□□□□ -2.3
SMSP52788 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.67□□□□□ -2.3
SMSP52788 MIR4791-201ENST00000607666 84 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNU6-94P-201ENST00000607728 107 ntBASIC0.67□□□□□ -2.3
SMSP52788 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
SMSP52788 RNU6-1205P-201ENST00000363625 106 ntBASIC0.66□□□□□ -2.3
SMSP52788 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SMSP52788 RNU6-102P-201ENST00000384485 104 ntBASIC0.66□□□□□ -2.3
SMSP52788 RNU6-763P-201ENST00000390865 106 ntBASIC0.66□□□□□ -2.3
SMSP52788 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
SMSP52788 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
SMSP52788 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.66□□□□□ -2.3
SMSP52788 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
SMSP52788 PMCHL1-202ENST00000423102 261 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms