Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RNF144AP50876 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF144AP50876 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF144AP50876 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF144AP50876 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 SNORA71.3-201ENST00000362582 128 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 MIR1289-1-201ENST00000408836 144 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 MIR3944-201ENST00000581277 108 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 MIR4276-201ENST00000584832 70 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 RNU6-86P-201ENST00000606534 107 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF144AP50876 AC006160.2-201ENST00000637708 154 ntBASIC3.06□□□□□ -1.92
RNF144AP50876 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RNF144AP50876 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RNF144AP50876 AL355596.1-201ENST00000565399 3996 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF144AP50876 SNORD115-3-201ENST00000363100 82 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 Y_RNA.430-201ENST00000384081 110 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 MIR516B2-201ENST00000385190 85 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 AL034345.1-201ENST00000407768 123 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 RPL32P35-201ENST00000415214 394 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 AC090844.1-201ENST00000422019 156 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 AC073261.1-201ENST00000429409 121 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 RNU7-12P-201ENST00000516030 62 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF144AP50876 DNAJC19P9-201ENST00000555084 351 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 MIR4791-201ENST00000607666 84 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 MIR548BB-201ENST00000626714 66 ntBASIC3.05□□□□□ -1.92
RNF144AP50876 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF144AP50876 SNORA26.6-201ENST00000391256 115 ntBASIC3.04□□□□□ -1.92
RNF144AP50876 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF144AP50876 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
RNF144AP50876 RNA5SP168-201ENST00000516642 112 ntBASIC3.04□□□□□ -1.92
RNF144AP50876 AC103810.7-201ENST00000607821 91 ntBASIC3.04□□□□□ -1.92
RNF144AP50876 MIR6717-201ENST00000622747 73 ntBASIC3.04□□□□□ -1.92
RNF144AP50876 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF144AP50876 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
RNF144AP50876 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF144AP50876 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF144AP50876 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF144AP50876 RNU6-776P-201ENST00000364403 104 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 RNU6-1019P-201ENST00000364424 107 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 RNU6-1022P-201ENST00000365049 104 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF144AP50876 MIR4506-201ENST00000584693 77 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 AC069114.2-201ENST00000604699 304 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 uc_338.1-201ENST00000612113 180 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 AC012314.7-201ENST00000619693 93 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 AC022513.1-201ENST00000624512 117 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 U6.105-201ENST00000637379 88 ntBASIC3.03□□□□□ -1.92
RNF144AP50876 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF144AP50876 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF144AP50876 AC007336.1-201ENST00000576365 3828 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 AL442644.1-201ENST00000454390 3105 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RNU6-509P-201ENST00000363519 107 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RNU6-461P-201ENST00000364195 107 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 Y_RNA.247-201ENST00000364500 92 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RNU6-1190P-201ENST00000410811 104 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 RPS12P2-201ENST00000439728 269 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 HSPE1P9-201ENST00000440046 311 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 MIR3616-201ENST00000584070 92 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 AC005786.1-201ENST00000588553 154 ntBASIC3.02□□□□□ -1.93
RNF144AP50876 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF144AP50876 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF144AP50876 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 MIR183-201ENST00000384958 110 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 MIR452-201ENST00000385020 85 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 MIR136-201ENST00000385207 82 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 Y_RNA.607-201ENST00000410597 98 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 CST9LP2-201ENST00000437612 320 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 AC115115.1-201ENST00000449927 248 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 PRSS3P4-201ENST00000453323 162 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 UBL5P1-201ENST00000507979 193 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF144AP50876 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 RNU7-2P-201ENST00000516096 62 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 AC026271.5-201ENST00000577873 130 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 U4atac.1-201ENST00000618345 95 ntBASIC3.01□□□□□ -1.93
RNF144AP50876 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RNF144AP50876 SNORA63.1-201ENST00000362493 131 ntBASIC3□□□□□ -1.93
RNF144AP50876 RNA5SP72-201ENST00000364442 117 ntBASIC3□□□□□ -1.93
RNF144AP50876 Y_RNA.609-201ENST00000410669 89 ntBASIC3□□□□□ -1.93
RNF144AP50876 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
RNF144AP50876 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3□□□□□ -1.93
RNF144AP50876 SCARNA20.6-201ENST00000517251 106 ntBASIC3□□□□□ -1.93
RNF144AP50876 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF144AP50876 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF144AP50876 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3□□□□□ -1.93
RNF144AP50876 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
RNF144AP50876 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF144AP50876 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
RNF144AP50876 RNU6-633P-201ENST00000362612 103 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms