Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU6-151P-201ENST00000364158 107 ntBASIC1.67□□□□□ -2.14
SOX2P48431 RNU6-597P-201ENST00000365620 102 ntBASIC1.67□□□□□ -2.14
SOX2P48431 SNORD61-201ENST00000384252 73 ntBASIC1.67□□□□□ -2.14
SOX2P48431 SNORD37.2-201ENST00000391075 66 ntBASIC1.67□□□□□ -2.14
SOX2P48431 MIR548O-201ENST00000408583 114 ntBASIC1.67□□□□□ -2.14
SOX2P48431 SUMO1P3-201ENST00000439961 304 ntBASIC1.67□□□□□ -2.14
SOX2P48431 AC093850.1-201ENST00000454121 251 ntBASIC1.67□□□□□ -2.14
SOX2P48431 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.67□□□□□ -2.14
SOX2P48431 RNU7-200P-201ENST00000516105 62 ntBASIC1.67□□□□□ -2.14
SOX2P48431 RNU6-693P-201ENST00000516134 107 ntBASIC1.67□□□□□ -2.14
SOX2P48431 RNU6-1270P-201ENST00000517128 108 ntBASIC1.67□□□□□ -2.14
SOX2P48431 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.67□□□□□ -2.14
SOX2P48431 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
SOX2P48431 MIR6844-201ENST00000637122 62 ntBASIC1.67□□□□□ -2.14
SOX2P48431 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
SOX2P48431 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SOX2P48431 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SOX2P48431 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SOX2P48431 RNU6-199P-201ENST00000362954 107 ntBASIC1.66□□□□□ -2.14
SOX2P48431 RNY1P5-201ENST00000383890 115 ntBASIC1.66□□□□□ -2.14
SOX2P48431 RNU6-746P-201ENST00000384112 109 ntBASIC1.66□□□□□ -2.14
SOX2P48431 MIR194-1-201ENST00000384892 85 ntBASIC1.66□□□□□ -2.14
SOX2P48431 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SOX2P48431 AC004965.1-201ENST00000413033 213 ntBASIC1.66□□□□□ -2.14
SOX2P48431 AC015922.2-201ENST00000435593 184 ntBASIC1.66□□□□□ -2.14
SOX2P48431 AL365434.2-201ENST00000607979 234 ntBASIC1.66□□□□□ -2.14
SOX2P48431 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
SOX2P48431 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.66□□□□□ -2.14
SOX2P48431 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
SOX2P48431 MIR3658-201ENST00000636291 56 ntBASIC1.66□□□□□ -2.14
SOX2P48431 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SOX2P48431 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SOX2P48431 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SOX2P48431 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
SOX2P48431 Y_RNA.400-201ENST00000383963 111 ntBASIC1.65□□□□□ -2.15
SOX2P48431 Y_RNA.506-201ENST00000384494 102 ntBASIC1.65□□□□□ -2.15
SOX2P48431 Y_RNA.542-201ENST00000384641 111 ntBASIC1.65□□□□□ -2.15
SOX2P48431 SNORA75.5-201ENST00000391291 81 ntBASIC1.65□□□□□ -2.15
SOX2P48431 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.65□□□□□ -2.15
SOX2P48431 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.65□□□□□ -2.15
SOX2P48431 RNU7-25P-201ENST00000516544 62 ntBASIC1.65□□□□□ -2.15
SOX2P48431 Y_RNA.703-201ENST00000516846 111 ntBASIC1.65□□□□□ -2.15
SOX2P48431 AC007751.1-201ENST00000529260 376 ntBASIC1.65□□□□□ -2.15
SOX2P48431 MIR3945-201ENST00000581853 98 ntBASIC1.65□□□□□ -2.15
SOX2P48431 AC015726.2-201ENST00000620112 122 ntBASIC1.65□□□□□ -2.15
SOX2P48431 AC095038.3-201ENST00000634439 195 ntBASIC1.65□□□□□ -2.15
SOX2P48431 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SOX2P48431 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
SOX2P48431 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SOX2P48431 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SOX2P48431 RNU4-11P-201ENST00000365287 132 ntBASIC1.64□□□□□ -2.15
SOX2P48431 MIR548A2-201ENST00000384956 97 ntBASIC1.64□□□□□ -2.15
SOX2P48431 MIR518F-201ENST00000384973 87 ntBASIC1.64□□□□□ -2.15
SOX2P48431 MIR136-201ENST00000385207 82 ntBASIC1.64□□□□□ -2.15
SOX2P48431 AL161935.2-201ENST00000414627 60 ntBASIC1.64□□□□□ -2.15
SOX2P48431 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
SOX2P48431 SUMO2P16-201ENST00000519475 264 ntBASIC1.64□□□□□ -2.15
SOX2P48431 DEFB122-202ENST00000569013 197 ntBASIC1.64□□□□□ -2.15
SOX2P48431 AL365205.2-201ENST00000594586 68 ntBASIC1.64□□□□□ -2.15
SOX2P48431 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
SOX2P48431 RNU6-774P-201ENST00000363238 107 ntBASIC1.63□□□□□ -2.15
SOX2P48431 SNORA70B-201ENST00000384210 135 ntBASIC1.63□□□□□ -2.15
SOX2P48431 RNU6-125P-201ENST00000384505 107 ntBASIC1.63□□□□□ -2.15
SOX2P48431 Y_RNA.547-201ENST00000384654 119 ntBASIC1.63□□□□□ -2.15
SOX2P48431 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
SOX2P48431 MIR513C-201ENST00000401352 84 ntBASIC1.63□□□□□ -2.15
SOX2P48431 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
SOX2P48431 AL356320.1-201ENST00000429616 163 ntBASIC1.63□□□□□ -2.15
SOX2P48431 AL445646.1-201ENST00000431784 216 ntBASIC1.63□□□□□ -2.15
SOX2P48431 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SOX2P48431 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.63□□□□□ -2.15
SOX2P48431 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
SOX2P48431 AC090142.3-201ENST00000519012 385 ntBASIC1.63□□□□□ -2.15
SOX2P48431 MIR3129-201ENST00000581095 76 ntBASIC1.63□□□□□ -2.15
SOX2P48431 MIR3133-201ENST00000583157 78 ntBASIC1.63□□□□□ -2.15
SOX2P48431 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
SOX2P48431 MIR219B-201ENST00000637023 88 ntBASIC1.63□□□□□ -2.15
SOX2P48431 SNORD115-28-201ENST00000363931 81 ntBASIC1.62□□□□□ -2.15
SOX2P48431 RNU6-457P-201ENST00000363999 107 ntBASIC1.62□□□□□ -2.15
SOX2P48431 Y_RNA.215-201ENST00000364204 112 ntBASIC1.62□□□□□ -2.15
SOX2P48431 SNORA1-201ENST00000384107 130 ntBASIC1.62□□□□□ -2.15
SOX2P48431 MIR516B2-201ENST00000385190 85 ntBASIC1.62□□□□□ -2.15
SOX2P48431 Z98742.3-201ENST00000418637 326 ntBASIC1.62□□□□□ -2.15
SOX2P48431 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.62□□□□□ -2.15
SOX2P48431 RNU6-830P-201ENST00000516353 107 ntBASIC1.62□□□□□ -2.15
SOX2P48431 SNORA18.4-201ENST00000516440 124 ntBASIC1.62□□□□□ -2.15
SOX2P48431 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.62□□□□□ -2.15
SOX2P48431 AC112693.2-201ENST00000556538 232 ntBASIC1.62□□□□□ -2.15
SOX2P48431 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
SOX2P48431 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
SOX2P48431 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
SOX2P48431 AC134878.1-201ENST00000619901 243 ntBASIC1.62□□□□□ -2.15
SOX2P48431 AC106754.2-201ENST00000623006 233 ntBASIC1.62□□□□□ -2.15
SOX2P48431 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SOX2P48431 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SOX2P48431 RNU6-1082P-201ENST00000364574 107 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNU6-818P-201ENST00000364837 108 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNU6-1292P-201ENST00000383856 107 ntBASIC1.61□□□□□ -2.15
SOX2P48431 Y_RNA.488-201ENST00000384403 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms