Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHRNA4P43681 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHRNA4P43681 Y_RNA.340-201ENST00000365330 92 ntBASIC3.01□□□□□ -1.93
CHRNA4P43681 RNU7-94P-201ENST00000459576 63 ntBASIC3.01□□□□□ -1.93
CHRNA4P43681 AC090821.2-201ENST00000523552 176 ntBASIC3.01□□□□□ -1.93
CHRNA4P43681 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
CHRNA4P43681 Y_RNA.788-201ENST00000622394 112 ntBASIC3.01□□□□□ -1.93
CHRNA4P43681 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHRNA4P43681 MIR6841-201ENST00000637129 72 ntBASIC3.01□□□□□ -1.93
CHRNA4P43681 SNORD115-34-201ENST00000362441 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-12-201ENST00000362583 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-29-201ENST00000362834 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-9-201ENST00000362912 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-21-201ENST00000362963 81 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-14-201ENST00000363090 81 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-41-201ENST00000363608 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-11-201ENST00000363616 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-5-201ENST00000363633 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-39-201ENST00000363694 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-4-201ENST00000363810 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-6-201ENST00000363942 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-42-201ENST00000364273 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-15-201ENST00000364809 81 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-26-201ENST00000365067 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-10-201ENST00000365073 81 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-43-201ENST00000365503 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SNORD115-36-201ENST00000365629 82 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-1319P-201ENST00000390855 104 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-747P-201ENST00000390928 104 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-129P-201ENST00000391022 107 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-241P-201ENST00000391148 104 ntBASIC3□□□□□ -1.93
CHRNA4P43681 MIR1265-201ENST00000408444 86 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-613P-201ENST00000410412 108 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU6-177P-201ENST00000411257 104 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RNU1-142P-201ENST00000516682 145 ntBASIC3□□□□□ -1.93
CHRNA4P43681 RPPH1-2P-201ENST00000516688 293 ntBASIC3□□□□□ -1.93
CHRNA4P43681 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3□□□□□ -1.93
CHRNA4P43681 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3□□□□□ -1.93
CHRNA4P43681 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3□□□□□ -1.93
CHRNA4P43681 MIR338-201ENST00000636369 67 ntBASIC3□□□□□ -1.93
CHRNA4P43681 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHRNA4P43681 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.99□□□□□ -1.93
CHRNA4P43681 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.99□□□□□ -1.93
CHRNA4P43681 MIR422A-201ENST00000362286 90 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 RNU6-1094P-201ENST00000362416 104 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 SNORA71.1-201ENST00000364523 117 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 CD24P4-201ENST00000382840 243 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 Y_RNA.510-201ENST00000384511 114 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 AC009969.1-201ENST00000438726 172 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.99□□□□□ -1.93
CHRNA4P43681 AL442644.1-201ENST00000454390 3105 ntBASIC2.99□□□□□ -1.93
CHRNA4P43681 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHRNA4P43681 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CHRNA4P43681 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
CHRNA4P43681 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.98□□□□□ -1.93
CHRNA4P43681 RNU6-478P-201ENST00000363904 110 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 Y_RNA.494-201ENST00000384432 111 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 SNORA40.18-201ENST00000391200 128 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 RNU7-45P-201ENST00000459460 63 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 AC114811.1-201ENST00000507207 168 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 RNA5SP341-201ENST00000516261 117 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.98□□□□□ -1.93
CHRNA4P43681 CTSLP2-204ENST00000629029 392 ntBASIC2.98□□□□□ -1.93
CHRNA4P43681 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHRNA4P43681 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHRNA4P43681 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
CHRNA4P43681 AC005336.3-201ENST00000623833 2679 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHRNA4P43681 SNORA22.1-201ENST00000362701 134 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 Y_RNA.57-201ENST00000362806 113 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 RNU6-546P-201ENST00000383991 107 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 MIR1289-1-201ENST00000408836 144 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.97□□□□□ -1.93
CHRNA4P43681 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.97□□□□□ -1.93
CHRNA4P43681 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
CHRNA4P43681 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHRNA4P43681 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CHRNA4P43681 AL035425.3-201ENST00000564206 4996 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 RNU7-2P-201ENST00000516096 62 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 MIR3152-201ENST00000579801 74 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 MIR4325-201ENST00000583049 90 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 AC103810.6-201ENST00000606708 136 ntBASIC2.96□□□□□ -1.94
CHRNA4P43681 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.94
CHRNA4P43681 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
CHRNA4P43681 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CHRNA4P43681 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CHRNA4P43681 RNU6-1083P-201ENST00000384022 107 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 Y_RNA.567-201ENST00000384736 106 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 RNA5SP482-201ENST00000391269 118 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 COTL1P1-201ENST00000422309 375 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 RNU6-871P-201ENST00000516122 100 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 RNU6-1041P-201ENST00000516254 102 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 IGLV3-17-201ENST00000519099 244 ntBASIC2.95□□□□□ -1.94
CHRNA4P43681 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.95□□□□□ -1.94
CHRNA4P43681 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms