Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Y_RNA.259-201ENST00000364619 101 ntBASIC0.22□□□□□ -2.37
SSR1P43307 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
SSR1P43307 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.22□□□□□ -2.37
SSR1P43307 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.22□□□□□ -2.37
SSR1P43307 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
SSR1P43307 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.22□□□□□ -2.37
SSR1P43307 AC087685.1-201ENST00000587507 141 ntBASIC0.22□□□□□ -2.37
SSR1P43307 AC134878.1-201ENST00000619901 243 ntBASIC0.22□□□□□ -2.37
SSR1P43307 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
SSR1P43307 Y_RNA.238-201ENST00000364441 102 ntBASIC0.21□□□□□ -2.38
SSR1P43307 Y_RNA.248-201ENST00000364501 109 ntBASIC0.21□□□□□ -2.38
SSR1P43307 Y_RNA.463-201ENST00000384271 102 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNY1P14-201ENST00000384426 108 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNU6-342P-201ENST00000384521 104 ntBASIC0.21□□□□□ -2.38
SSR1P43307 MT-TN-201ENST00000387400 73 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNU6-913P-201ENST00000390913 95 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNU6-383P-201ENST00000410864 94 ntBASIC0.21□□□□□ -2.38
SSR1P43307 MTND1P34-201ENST00000438556 671 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNU7-67P-201ENST00000459003 62 ntBASIC0.21□□□□□ -2.38
SSR1P43307 Y_RNA.666-201ENST00000516187 112 ntBASIC0.21□□□□□ -2.38
SSR1P43307 RNU6-911P-201ENST00000516523 104 ntBASIC0.21□□□□□ -2.38
SSR1P43307 MIR4264-201ENST00000583520 66 ntBASIC0.21□□□□□ -2.38
SSR1P43307 Y_RNA.241-201ENST00000364470 117 ntBASIC0.2□□□□□ -2.38
SSR1P43307 Y_RNA.383-201ENST00000383855 97 ntBASIC0.2□□□□□ -2.38
SSR1P43307 RNU6-1040P-201ENST00000383974 107 ntBASIC0.2□□□□□ -2.38
SSR1P43307 SNORA72.4-201ENST00000384174 132 ntBASIC0.2□□□□□ -2.38
SSR1P43307 MIR216A-201ENST00000385063 110 ntBASIC0.2□□□□□ -2.38
SSR1P43307 RNU6-308P-201ENST00000390957 107 ntBASIC0.2□□□□□ -2.38
SSR1P43307 MIR548O-201ENST00000408583 114 ntBASIC0.2□□□□□ -2.38
SSR1P43307 AC099799.1-201ENST00000439809 192 ntBASIC0.2□□□□□ -2.38
SSR1P43307 SNORA18.4-201ENST00000516440 124 ntBASIC0.2□□□□□ -2.38
SSR1P43307 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR1P43307 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.2□□□□□ -2.38
SSR1P43307 AC092794.1-201ENST00000612734 582 ntBASIC0.2□□□□□ -2.38
SSR1P43307 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.2□□□□□ -2.38
SSR1P43307 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.19□□□□□ -2.38
SSR1P43307 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
SSR1P43307 SNORA1.2-201ENST00000365189 134 ntBASIC0.19□□□□□ -2.38
SSR1P43307 RNY4P36-201ENST00000391116 96 ntBASIC0.19□□□□□ -2.38
SSR1P43307 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.19□□□□□ -2.38
SSR1P43307 FGF7P6-202ENST00000451282 293 ntBASIC0.19□□□□□ -2.38
SSR1P43307 RNU7-102P-201ENST00000458948 62 ntBASIC0.19□□□□□ -2.38
SSR1P43307 SCARNA8-201ENST00000515924 131 ntBASIC0.19□□□□□ -2.38
SSR1P43307 RNU6-277P-201ENST00000516272 106 ntBASIC0.19□□□□□ -2.38
SSR1P43307 SNORA4-201ENST00000584302 138 ntBASIC0.19□□□□□ -2.38
SSR1P43307 AC092447.9-201ENST00000603395 144 ntBASIC0.19□□□□□ -2.38
SSR1P43307 Y_RNA.772-201ENST00000606692 102 ntBASIC0.19□□□□□ -2.38
SSR1P43307 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
SSR1P43307 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SSR1P43307 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
SSR1P43307 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
SSR1P43307 Y_RNA.551-201ENST00000384661 102 ntBASIC0.18□□□□□ -2.38
SSR1P43307 RNU6-21P-201ENST00000384710 107 ntBASIC0.18□□□□□ -2.38
SSR1P43307 MIR518F-201ENST00000384973 87 ntBASIC0.18□□□□□ -2.38
SSR1P43307 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
SSR1P43307 MIR938-201ENST00000401216 83 ntBASIC0.18□□□□□ -2.38
SSR1P43307 RNA5SP94-201ENST00000516917 108 ntBASIC0.18□□□□□ -2.38
SSR1P43307 Y_RNA.718-201ENST00000517110 102 ntBASIC0.18□□□□□ -2.38
SSR1P43307 SNORD116.3-201ENST00000517176 78 ntBASIC0.18□□□□□ -2.38
SSR1P43307 AC007751.1-201ENST00000529260 376 ntBASIC0.18□□□□□ -2.38
SSR1P43307 SNORD58B-201ENST00000607313 66 ntBASIC0.18□□□□□ -2.38
SSR1P43307 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.18□□□□□ -2.38
SSR1P43307 AC022709.1-201ENST00000615967 87 ntBASIC0.18□□□□□ -2.38
SSR1P43307 AC010205.1-201ENST00000616668 449 ntBASIC0.18□□□□□ -2.38
SSR1P43307 RNU6-1309P-201ENST00000363305 108 ntBASIC0.17□□□□□ -2.38
SSR1P43307 Y_RNA.428-201ENST00000384078 102 ntBASIC0.17□□□□□ -2.38
SSR1P43307 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
SSR1P43307 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SSR1P43307 RNU6-1190P-201ENST00000410811 104 ntBASIC0.17□□□□□ -2.38
SSR1P43307 RNU6-130P-201ENST00000411112 103 ntBASIC0.17□□□□□ -2.38
SSR1P43307 AC024067.1-201ENST00000426199 223 ntBASIC0.17□□□□□ -2.38
SSR1P43307 RNU4-77P-201ENST00000516692 156 ntBASIC0.17□□□□□ -2.38
SSR1P43307 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
SSR1P43307 MIR2681-201ENST00000581814 105 ntBASIC0.17□□□□□ -2.38
SSR1P43307 AL049861.1-201ENST00000603130 150 ntBASIC0.17□□□□□ -2.38
SSR1P43307 PART1_1.1-201ENST00000611761 217 ntBASIC0.17□□□□□ -2.38
SSR1P43307 RNU6-674P-201ENST00000363831 107 ntBASIC0.16□□□□□ -2.38
SSR1P43307 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
SSR1P43307 MIR588-201ENST00000384900 83 ntBASIC0.16□□□□□ -2.38
SSR1P43307 POLR2KP2-201ENST00000438155 177 ntBASIC0.16□□□□□ -2.38
SSR1P43307 AL138752.1-201ENST00000452964 351 ntBASIC0.16□□□□□ -2.38
SSR1P43307 RNU7-149P-201ENST00000516739 59 ntBASIC0.16□□□□□ -2.38
SSR1P43307 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
SSR1P43307 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.16□□□□□ -2.38
SSR1P43307 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.16□□□□□ -2.38
SSR1P43307 MIR6515-201ENST00000619843 57 ntBASIC0.16□□□□□ -2.38
SSR1P43307 Y_RNA.116-201ENST00000363292 103 ntBASIC0.15□□□□□ -2.39
SSR1P43307 Y_RNA.354-201ENST00000365448 111 ntBASIC0.15□□□□□ -2.39
SSR1P43307 Y_RNA.462-201ENST00000384268 102 ntBASIC0.15□□□□□ -2.39
SSR1P43307 RNU6-364P-201ENST00000384387 107 ntBASIC0.15□□□□□ -2.39
SSR1P43307 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
SSR1P43307 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
SSR1P43307 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
SSR1P43307 RNU7-185P-201ENST00000459215 60 ntBASIC0.15□□□□□ -2.39
SSR1P43307 snoU13.16-201ENST00000459350 104 ntBASIC0.15□□□□□ -2.39
SSR1P43307 RNU6-1046P-201ENST00000516538 107 ntBASIC0.15□□□□□ -2.39
SSR1P43307 AC133104.2-201ENST00000615272 193 ntBASIC0.15□□□□□ -2.39
SSR1P43307 AC022140.2-201ENST00000623500 188 ntBASIC0.15□□□□□ -2.39
SSR1P43307 MIR1302-1-201ENST00000637932 143 ntBASIC0.15□□□□□ -2.39
SSR1P43307 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms